Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10p04
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 95 6e-20
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 86 3e-17
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 83 2e-16
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 83 2e-16
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 83 2e-16
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 73 3e-13
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 73 3e-13
Z81497-4|CAB04079.2| 458|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z66519-7|CAA91378.2| 338|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity ... 28 5.7
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 28 7.5
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 9.9
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 94.7 bits (225), Expect = 6e-20
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +1
Query: 403 KLPPIP-DGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIA 579
KL P+P DGGWGWVVV +F + DG +SFG+L E+ F + + TSLI S+
Sbjct: 9 KLVPLPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTG 68
Query: 580 TPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
L AGP+ASA+ +++GCR+ TII ++ +G LL+ + +
Sbjct: 69 FTLGAGPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEI 110
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +1
Query: 403 KLPPIP-DGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIA 579
KL P+P DGGWGWVVV +F V DG +SFG+L E F + + +LI SL
Sbjct: 12 KLVPLPPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVETLMEEFHASNTMAALIISLLTG 71
Query: 580 TPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
L +GP+ASA+ +++GCR+ TI ++ +G L+ + ++
Sbjct: 72 LTLGSGPLASAVCNKYGCRITTITGAGVAFVGCALSYFATAM 113
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/100 (36%), Positives = 62/100 (62%)
Frame = +1
Query: 406 LPPIPDGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIATP 585
+P PDGG+GWV+V +AF+ + VDG++ +F + + ++ + T IGSL I T
Sbjct: 66 VPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTY 125
Query: 586 LLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
LL GP+ SA+ +++ R + + GL+S I F++A S ++
Sbjct: 126 LLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNI 165
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/100 (36%), Positives = 62/100 (62%)
Frame = +1
Query: 406 LPPIPDGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIATP 585
+P PDGG+GWV+V +AF+ + VDG++ +F + + ++ + T IGSL I T
Sbjct: 11 VPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTY 70
Query: 586 LLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
LL GP+ SA+ +++ R + + GL+S I F++A S ++
Sbjct: 71 LLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNI 110
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/100 (36%), Positives = 62/100 (62%)
Frame = +1
Query: 406 LPPIPDGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIATP 585
+P PDGG+GWV+V +AF+ + VDG++ +F + + ++ + T IGSL I T
Sbjct: 66 VPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTY 125
Query: 586 LLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
LL GP+ SA+ +++ R + + GL+S I F++A S ++
Sbjct: 126 LLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNI 165
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/99 (31%), Positives = 58/99 (58%)
Frame = +1
Query: 409 PPIPDGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIATPL 588
P DGG+GW+VV ++FL+ A DG +F FG++ + +F+ + + + S+F++ PL
Sbjct: 64 PVYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCGRFVSMITASMFLSLPL 123
Query: 589 LAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
+ P+A + D GCR+ II + T+ ++A + +
Sbjct: 124 IMSPVAGIVSDILGCRMSIIIGASICTVSCIIAMFCSHI 162
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +1
Query: 418 PDGGWGWVVVASAFLVSACVDGLAFSFG-LLHEEFTRYFETTQSQTSLIGSLFIATPLLA 594
PDGG+GW +VA++FL++ VDG+ F+ G +L + F +++ ++ S+ A
Sbjct: 34 PDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPAWVHSFGISEASAAMTMSILSGCYFFA 93
Query: 595 GPIASAIVDRFGCRVMTIIAGLLSTIGFLLA 687
GPIAS + + FGCR + + L++ +GFLL+
Sbjct: 94 GPIASVLCNVFGCRQVALAGSLIAALGFLLS 124
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +1
Query: 403 KLPPIPDGGWGWVVVASAFLVSACVDGLAFSFG-LLHEEFTRYFETTQSQTSLIGSLFIA 579
K+ P PDGG+GWVVVA++FLV+ VDG+ ++ G +L + F +T ++I S+
Sbjct: 36 KVTP-PDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVI-SILTG 93
Query: 580 TPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
LAGP+AS+ V+ FG R + I +L+T FLL+ ++++
Sbjct: 94 CYYLAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTI 135
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +1
Query: 403 KLPPIPDGGWGWVVVASAFLVSACVDGLAFSFG-LLHEEFTRYFETTQSQTSLIGSLFIA 579
K+ P PDGG+GWVVVA++FLV+ VDG+ ++ G +L + F +T ++I S+
Sbjct: 36 KVTP-PDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVI-SILTG 93
Query: 580 TPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
LAGP+AS+ V+ FG R + I +L+T FLL+ ++++
Sbjct: 94 CYYLAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTI 135
>Z81497-4|CAB04079.2| 458|Caenorhabditis elegans Hypothetical
protein F10C2.7 protein.
Length = 458
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 517 FTRYFETTQSQTSLIGSLFIATPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLL 684
+ RY + +++++ ++ I T L GPI + V RFG R+ IAG++S +L
Sbjct: 53 YNRYDYSVAEKSAIVWAVAIGTILGTGPINYSYV-RFGARIPFFIAGIVSAFATVL 107
>Z66519-7|CAA91378.2| 338|Caenorhabditis elegans Hypothetical
protein B0334.7 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -1
Query: 441 HPSPAPIRYRRQFFLE*LLGIKTVFVVIIIINAHELYSFYWRLY 310
H SP + +++FF++ + + VVI++ + YS W+ Y
Sbjct: 230 HMSPTTRKLQQKFFIDMIFQVSMPVVVIVLPMIYCFYSIVWQQY 273
>Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical
protein F31F6.6 protein.
Length = 582
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +1
Query: 436 WVVVASAFLVSACVDGLAFS-FGLLHEEFTRYFETTQSQTSLIGSLFIATPL----LAGP 600
WV A ++A + + F FG++ E + +G L +A + L
Sbjct: 55 WVFEALPLAITAFIPMILFPLFGIMRSEEVARAYLPDTCFLFMGGLMVALAVEKCELHAR 114
Query: 601 IASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNS 702
+A ++ G ++AG + GFL ISN+
Sbjct: 115 VALFVLKTVGSEPARVMAGFMGVTGFLSMWISNT 148
>AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity
dicarboxylate transporterINDY1 protein.
Length = 582
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +1
Query: 436 WVVVASAFLVSACVDGLAFS-FGLLHEEFTRYFETTQSQTSLIGSLFIATPL----LAGP 600
WV A ++A + + F FG++ E + +G L +A + L
Sbjct: 55 WVFEALPLAITAFIPMILFPLFGIMRSEEVARAYLPDTCFLFMGGLMVALAVEKCELHAR 114
Query: 601 IASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNS 702
+A ++ G ++AG + GFL ISN+
Sbjct: 115 VALFVLKTVGSEPARVMAGFMGVTGFLSMWISNT 148
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 521 VNSSCRSPNEKARP--STQADTRKAEATTTHPQPPSGIGGSFFWN 393
++S+ R+ + +P ST + T + TTT P P + +G +F +N
Sbjct: 109 ISSTTRTVSRSIKPETSTASTTIRPLTTTTTPAPSNNVGCTFGFN 153
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 521 VNSSCRSPNEKARPSTQADTRKAEATTTHPQP 426
V+++ P A +T+ T KA ATT P P
Sbjct: 248 VSTTTEEPTTTAESTTKKSTTKAPATTEEPTP 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,752,739
Number of Sequences: 27780
Number of extensions: 256608
Number of successful extensions: 870
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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