Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10p02
(696 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.1
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 2.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 6.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.5
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 394 TFFHHEYPWILSASDDQTIRIWNWQSRQCISVLT 495
+ F +YPW+L S + IR + + +SVLT
Sbjct: 99 SLFWQQYPWVLGVSLCK-IRAYVSEMSSYVSVLT 131
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 312 ISARHEKRLLNMEANSTYWTI 250
+ RHEKRLLN E S+Y T+
Sbjct: 50 LCGRHEKRLLN-ELLSSYNTL 69
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 355 LFTLLGHLDYIRTTFFHHEY 414
LF+ L ++ T+FHH Y
Sbjct: 25 LFSFLRTRTKLQPTYFHHTY 44
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 312 ISARHEKRLLNMEANSTYWTI 250
+ RHEKRLLN E S+Y T+
Sbjct: 50 LCGRHEKRLLN-ELLSSYNTL 69
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 355 LFTLLGHLDYIRTTFFHHEY 414
LF+ L ++ T+FHH Y
Sbjct: 25 LFSFLRTRTKLQPTYFHHTY 44
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 280 YGSKFHVLDHHVH 242
YG +H+ +HHVH
Sbjct: 270 YGGVYHLDNHHVH 282
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 266 PRTGPSCSSNFSSN 225
PRTG +CSS SS+
Sbjct: 12 PRTGTNCSSGSSSD 25
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 343 QRRCLFTLLGHLDYIRTT 396
+R + T++GH+D+ +TT
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 468 LPIPNSYGLIIRCT*NPWVFMMEE 397
+P+P YG + PW+ + E+
Sbjct: 117 IPVPVYYGNFLPRPMGPWISIQEQ 140
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 468 LPIPNSYGLIIRCT*NPWVFMMEE 397
+P+P YG + PW+ + E+
Sbjct: 120 IPVPVYYGNFLPRPMGPWISIQEQ 143
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 468 LPIPNSYGLIIRCT*NPWVFMMEE 397
+P+P YG + PW+ + E+
Sbjct: 120 IPVPVYYGNFLPRPMGPWISIQEQ 143
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 468 LPIPNSYGLIIRCT*NPWVFMMEE 397
+P+P YG + PW+ + E+
Sbjct: 120 IPVPVYYGNFLPRPMGPWISIQEQ 143
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 468 LPIPNSYGLIIRCT*NPWVFMMEE 397
+P+P YG + PW+ + E+
Sbjct: 120 IPVPVYYGNFLPRPMGPWISIQEQ 143
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 102 VKKIRDEVCAGERHIVSC 155
VK+ D++C R +VSC
Sbjct: 1694 VKETDDKICFTMRPVVSC 1711
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 577 LQTGLMKQKQEDLQWDGIEH 518
L+T L + ++ +W G+EH
Sbjct: 738 LRTLLQRGQETGAEWPGLEH 757
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,318
Number of Sequences: 438
Number of extensions: 4401
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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