Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10o13
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 213 TSSILPATFQLLPSIPYCTTTSGRFLR 293
           T+ +LP+ FQ  PSI    T S   L+
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNSSLQ 556


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 71  PTHPLIEDVVMATNQAIIDYKV 136
           P H    D+V+ + Q   DYK+
Sbjct: 334 PLHDATRDLVLMSEQFEADYKL 355


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 71  PTHPLIEDVVMATNQAIIDYKV 136
           P H    D+V+ + Q   DYK+
Sbjct: 334 PLHDATRDLVLMSEQFEADYKL 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,546
Number of Sequences: 438
Number of extensions: 2417
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)