Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10n23
(831 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1023 + 33580416-33580904 33 0.28
09_04_0381 + 17128437-17128655,17129250-17129331,17129409-171295... 32 0.49
05_02_0063 + 6260447-6260688,6261214-6261322 32 0.49
08_01_0931 + 9177466-9177493,9178205-9178317,9178418-9178759,917... 31 1.1
09_04_0559 + 18516732-18516746,18516893-18517330 31 1.5
01_06_1151 + 34937738-34937855,34937959-34939244 30 2.0
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 30 2.0
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 30 2.6
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 30 2.6
06_03_0144 + 17219065-17219142,17219694-17220068 30 2.6
01_02_0018 - 10233009-10233473,10234022-10234099 30 2.6
06_01_0620 + 4508722-4508875,4509566-4509830,4510092-4510230 29 3.4
11_01_0295 + 2217496-2218092,2218774-2218876,2219140-2219249,221... 29 4.5
06_02_0063 + 11052916-11053106,11054865-11054945,11055314-110553... 29 4.5
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 4.5
03_01_0232 + 1824517-1825506 29 6.0
02_05_0528 - 29782382-29782864,29782994-29783092,29783319-297833... 29 6.0
01_06_1093 + 34471262-34471334,34474526-34476759 29 6.0
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 28 7.9
02_01_0405 - 2952434-2955583 28 7.9
01_01_0453 - 3361460-3361549,3361660-3361846,3362038-3362139,336... 28 7.9
>02_05_1023 + 33580416-33580904
Length = 162
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +3
Query: 534 AATVSVEGGDACAPEYPGTASCKSADAGR-CRQRMRSTALLACRWLRALNCSRTAGCAHC 710
A TV+ G A + G + AG R+R ++ ACRW A C C
Sbjct: 79 AITVACVGRSAAVHRFGGGGVLREVGAGAIARRRRTASGAAACRWRSAPPCGACRDVRAC 138
Query: 711 SRAAGCARSSTSG 749
RA R + G
Sbjct: 139 CRAVEWWRRAKGG 151
>09_04_0381 +
17128437-17128655,17129250-17129331,17129409-17129564,
17129646-17130431,17130743-17131094,17131467-17131548,
17131756-17131833,17132041-17132055
Length = 589
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 715 REQCAQPAVREQLSARSQRHASSAVDLIRWR----QRPASADLHDAVPGYSGAHASP 557
+E PA R QR S AV L++ R QRPAS D PG++GA SP
Sbjct: 140 QEPTKSPADRTTGECLYQRRRSEAV-LLQGRKGLKQRPASLDFGSGSPGFNGAPLSP 195
>05_02_0063 + 6260447-6260688,6261214-6261322
Length = 116
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -3
Query: 724 PAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRPASADLHDAVPGYSGAHASPPSTE 545
P +Q + + +A + R + +V L W+ RP P SG AS P+T
Sbjct: 2 PPPEQQWRWQRLSPRAAAATSRGSGGSVLLREWQGRPPPVSGDSGSPTTSGVAASSPTTG 61
Query: 544 TVAAGRKN 521
+ AA N
Sbjct: 62 SAAASSPN 69
>08_01_0931 +
9177466-9177493,9178205-9178317,9178418-9178759,
9178935-9179139,9179322-9179344
Length = 236
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = -3
Query: 793 PAQVAAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSAR-SQRHASSAVDL-IR--W 626
P R A D E+ A + E P R L R Q A++++DL +R W
Sbjct: 24 PRVFGQRGGAADDEDDEMKPTAATSPGEIEVGPRKRRWLRCRWRQGRAAASLDLTVRADW 83
Query: 625 RQRPASADL---HDAVPGYSGAHASPPSTETVAAGR 527
R+ A A L DA+P SG + E VAA R
Sbjct: 84 RRTTAVAPLVADEDALPAASGRNGDEAGEEDVAAER 119
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -3
Query: 796 EPAQVAAREQCAQDARPEVDE-RAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQ 620
EPA + ++A PE E A+PA E +PA + A+ A+ + ++ +
Sbjct: 63 EPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEAEAKEAEPAAQVAEEVK-EE 121
Query: 619 RPASADLHDAVPGYSGAHASPPSTE 545
A A + V A + P E
Sbjct: 122 EAAPAPAAEEVKVEEAAPVAEPEAE 146
>01_06_1151 + 34937738-34937855,34937959-34939244
Length = 467
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/73 (32%), Positives = 28/73 (38%)
Frame = -3
Query: 793 PAQVAAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRP 614
PA AA + D ++ QPA R A E SARS RW P
Sbjct: 386 PAAAAAAASGSTDRPKKIFSAPQPAVRRLDDDDAGEEHASARSNLSGDQ-----RWPASP 440
Query: 613 ASADLHDAVPGYS 575
A LH + GYS
Sbjct: 441 AEGPLHRML-GYS 452
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = -3
Query: 802 AGEPAQVAAREQCAQDARPEVDERAQPAAREQCAQPA--VREQLSARSQRHASSAVDLIR 629
A A+ A Q A E ERA ARE+ A+ A +E+++ ++ A+ A R
Sbjct: 591 AEREARQRAERAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKAAAEAR 650
Query: 628 WRQRPASADLHDAVPGYSGAHASPPSTETVAAGRKNNCAWRSVQNCDSVLR 476
R A+ + + + A A + + VAA + +V+ + R
Sbjct: 651 ER---AATEAREKAAAEARAKAERAAVDKVAAEARRRAERAAVERAAAEAR 698
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = -3
Query: 802 AGEPAQVAAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWR 623
A + AQ ARE+ A DAR E ERA A+E+ A A +E+++ +++ A++ +
Sbjct: 598 AVQRAQKEARERAAVDAR-ERAERAAAEAKERAAAEA-KEKVATQARDRAAAERAAVERA 655
Query: 622 QRPA 611
Q+ A
Sbjct: 656 QQEA 659
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 763 AQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRPASAD 602
A D E +E A+ AAR + A+ A RE+ R Q A+++ + R R +AD
Sbjct: 374 AADRLREAEEAARGAARARQAEEAAREEARLR-QAEATTSSEATRETDRQEAAD 426
>06_03_0144 + 17219065-17219142,17219694-17220068
Length = 150
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 507 RHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCS 686
RHA + + + GG+A AS A A + +QR R L+ WL N +
Sbjct: 13 RHASHEVGEFREIDLNGGNATKA---ANASHGGAQAQQQQQRQRDCQLMGLTWLLHRNAT 69
Query: 687 RTAGCAHCSRAAGCARSSTSGR-ASCA 764
R A A A +GR A C+
Sbjct: 70 RHGAAATAVIQALMAADDATGRPAPCS 96
>01_02_0018 - 10233009-10233473,10234022-10234099
Length = 180
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = -3
Query: 766 CAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRPASADLHDA 590
C AR ++E +PA R + AQP V E SAR R V L R RP DA
Sbjct: 49 CIWPARQWLEEGRKPAWRRE-AQPMVAEAGSAREARAVEMEVGLAR-EARPVVGGRIDA 105
>06_01_0620 + 4508722-4508875,4509566-4509830,4510092-4510230
Length = 185
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -3
Query: 781 AAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRPASAD 602
AA A+ RP R P +R AV+++++ + RH + ++ + RP
Sbjct: 100 AAARASARKPRPRPSSRRAPTSRTVVHVAAVKDEMAQQKLRHRAIVHAILHYWMRPFITT 159
Query: 601 LHDAVPGY 578
L V +
Sbjct: 160 LKPIVSNF 167
>11_01_0295 +
2217496-2218092,2218774-2218876,2219140-2219249,
2219328-2219399,2219653-2219814,2220300-2220510,
2220613-2220948,2221050-2221162
Length = 567
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 607 ADLHDAVPGYSGAHASPPSTETVAAGRKNNCA 512
ADL D + G G+H P ST+ G + A
Sbjct: 122 ADLKDLIAGLYGSHPQPSSTDAAEVGTQEGSA 153
>06_02_0063 +
11052916-11053106,11054865-11054945,11055314-11055362,
11055468-11055576,11056356-11056408,11056555-11056617,
11057398-11057745
Length = 297
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 781 AAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSA 644
AA A ++ E D+R + AA E PAV + S S +H A
Sbjct: 11 AAAPVVAPESAAEGDQRVEGAAGEDSVGPAVAPEASVDSDQHIEDA 56
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 666 LRALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAGSP 800
L A++ S A CS AGCA SS S + + R C GSP
Sbjct: 116 LVAIDPSNDAAWVPCSACAGCAASSPSFSPTQSSTYRTVPC-GSP 159
>03_01_0232 + 1824517-1825506
Length = 329
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 618 RCRQRMRSTALLACRWLRALNCSRTAGCAH--CSRAAGCARSSTSGRASCAHCSRAATCA 791
R R R A L R + SR A R++ A +S SG A+ A AATCA
Sbjct: 146 RRRDATRLAAALRARRRSDRDLSRLASTLRDLSYRSSSAAATSDSGEAALAEAVGAATCA 205
Query: 792 GSPA 803
+ A
Sbjct: 206 AAAA 209
>02_05_0528 -
29782382-29782864,29782994-29783092,29783319-29783387,
29783781-29783888,29783965-29784274,29784772-29784812,
29784886-29784942,29785290-29785448,29785587-29785655,
29785728-29785877,29785967-29786098,29786347-29786433,
29786516-29786686,29786760-29786960,29787348-29787416,
29787510-29787618,29787887-29788005,29788676-29788780,
29789377-29789755,29790022-29790150,29790223-29790402,
29791310-29791469,29791604-29791744,29791832-29792021,
29792100-29792161,29792879-29793107
Length = 1335
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -3
Query: 799 GEPAQVAAREQC-----AQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHAS 650
G A VAA + +DA+PE++E ++PA E A +EQ A + A+
Sbjct: 17 GSQAAVAAEPEVPVTDGVEDAKPEIEEVSEPAVVEGSDTGAEKEQGDAAGETQAA 71
>01_06_1093 + 34471262-34471334,34474526-34476759
Length = 768
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 522 FLRPAATVSVEGGDACAPE-YPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAG 698
+L+P ++ G C PG SC A S+ LL CR L C +
Sbjct: 522 YLKPLRSMKPFQGCRCTSVCLPGDTSCDCAQHNGGDLPYSSSGLLVCRKLMVYECGESCR 581
Query: 699 CA 704
C+
Sbjct: 582 CS 583
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = -3
Query: 745 EVDERAQPAAREQCAQPAVREQLSARS-QRHASSAVDLIRWRQRPASADLHDAVPGYSGA 569
E+ R +E C PA+ + L +S QR VDL+R + + + P S
Sbjct: 585 EISHRVSMITKEACINPAMADILITKSPQRIGEEPVDLMRGN----AQSMQELEPSSS-- 638
Query: 568 HASPPSTETVAAGRKNNCAWRSVQNCDSVLRLDGTG 461
+ V A +KNN RS + +D G
Sbjct: 639 --IRDHKQIVLANQKNNIISRSHNETQASSEIDSIG 672
>02_01_0405 - 2952434-2955583
Length = 1049
Score = 28.3 bits (60), Expect = 7.9
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 411 CLEHNYTREIVRLMTTLPVPSNRNTLSQFCTERHAQLFLRPAATVSVEGGDACAPEYPGT 590
C +H+ I L L + N +L+ CTE+ LR +S +GG A A GT
Sbjct: 8 CKKHSNKFPIPVLALALVLLINLASLTSSCTEQDRSSLLRFLRELSQDGGLA-ASWQDGT 66
Query: 591 ASCKSADAGRCRQRMRSTAL-LACRWLR 671
CK D C Q T + LA R L+
Sbjct: 67 DCCK-WDGITCSQDSTVTDVSLASRSLQ 93
>01_01_0453 -
3361460-3361549,3361660-3361846,3362038-3362139,
3362239-3362306,3362976-3363175,3363253-3363595,
3363837-3363893,3364011-3364727,3364805-3365007,
3365171-3365297
Length = 697
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 414 LEHNYTREIVRLMTTLPVPSNRNTLS 491
L+H TR+++ L PV +N+N LS
Sbjct: 147 LDHRQTRDLISLFLPAPVRANQNKLS 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,559,160
Number of Sequences: 37544
Number of extensions: 413927
Number of successful extensions: 1513
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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