Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10n23
(831 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 33 0.38
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.50
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 32 0.66
SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_13095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 31 1.5
SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_17477| Best HMM Match : PSI (HMM E-Value=1.7) 31 1.5
SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1) 30 2.6
SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 30 2.6
SB_12112| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 30 2.6
SB_34049| Best HMM Match : PSI (HMM E-Value=2.6) 30 2.6
SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 29 4.6
SB_12370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 29 6.1
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6) 28 8.1
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 8.1
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 32.7 bits (71), Expect = 0.38
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = -3
Query: 799 GEPAQVAAREQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQ 620
G AQ A + AQ P D AQP A E AQP + + A++ +
Sbjct: 357 GATAQPEAPDATAQPEAP--DATAQPEATETTAQPEAPKATALPEAPKATAQPEAPEATA 414
Query: 619 RPASADLHDAVPGYSGAHASPPSTETVA 536
+P A A+P A A P +TET A
Sbjct: 415 QP-EAPKATALPEAPEATAQPEATETTA 441
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +3
Query: 543 VSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCSRA 719
V + GG C+ E A CK AD G +R RS +R L T G C+RA
Sbjct: 241 VPINGGRTCSGESRENAPCKVADCGEGERRRRS--------IRELKQVNTNGIKDCARA 291
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Frame = +3
Query: 534 AATVSVEGGDACAPEYPGTASCKSA-DAGRCRQR---MRSTALLACRWLRALN-CSRTA- 695
A V++ GG C G A C + D RC R + C +N C+R
Sbjct: 173 ARCVTMNGGARCVT-MNGCARCVTIYDCARCVTMNGCARCVTMNGCARCVTMNGCARCVT 231
Query: 696 --GCAHCSRAAGCARSSTSGRASC 761
GCA C GCAR T +C
Sbjct: 232 MNGCARCVTMNGCARCVTMNGCAC 255
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSST-SGRASCAHCSRAATC 788
R C GC+ C GCAR T +G A C + A C
Sbjct: 153 RGKRCVTMNGCSCCVTMNGCARCVTMNGGARCVTMNGCARC 193
>SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 417 EHNYTREIVRLMTTLPVPSNRNTLSQFCTERHAQL 521
EH +T +I +L T+P NTL + C +RHA L
Sbjct: 545 EHAFTNDIEQLPFTIPRLEMLNTLLRECIDRHAPL 579
>SB_13095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = +3
Query: 453 TTLPVPSNRNTLSQFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQ- 629
T + S+ +TL CT+R ++ P A+V + G + + G A ++ RQ
Sbjct: 387 TAILPSSSSSTLVTNCTQR--RIIKIPEASVKICGSEK-NDLHKGGAKTSPSNCKTMRQT 443
Query: 630 ---RMRSTALLACRWLRALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
++RST +C + C H GC T+G+ +C C T A
Sbjct: 444 PGEKLRSTICKSCSRSLEKQPAFQLPCKHLI-CRGCLTGRTAGQMTCVECKSPYTHA 499
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = +3
Query: 492 QFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWL- 668
+F + +L R V++ G C G A C + + C + + C +
Sbjct: 635 RFSGHQLLELVTRGKRCVTMNGCSCCVT-MNGCARCVTMNG--CARCVTMNGCARCVTIY 691
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHC 770
C GCA C GCAR T CA C
Sbjct: 692 ECARCVTMNGCARCVTMNGCARCVTMN--GCARC 723
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 657 CRWLRALNCSRTA-GCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
C + +C T GCA C GCAR T CA C CA
Sbjct: 651 CVTMNGCSCCVTMNGCARCVTMNGCARCVTMN--GCARCVTIYECA 694
>SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 657 CRWLRALNCSRTA-GCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
C + +C T GCA C GCAR T CA C CA
Sbjct: 433 CVTMNGCSCCVTMNGCARCVTMNGCARCVTMN--GCARCVTIYDCA 476
>SB_17477| Best HMM Match : PSI (HMM E-Value=1.7)
Length = 206
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/85 (27%), Positives = 28/85 (32%), Gaps = 8/85 (9%)
Frame = +3
Query: 558 GDACAPEYPGTASCKSADA-GRCRQR---MRSTALLACRWLRALN----CSRTAGCAHCS 713
G AC G + C + + RC R + C +N C GCA C
Sbjct: 107 GCACCVTMNGCSRCVTMNGCARCVTMNGCARCVTIYGCARCVTMNGCPRCVTMNGCARCV 166
Query: 714 RAAGCARSSTSGRASCAHCSRAATC 788
GCAR T C TC
Sbjct: 167 TIYGCARCVTMNGCLCCVTMNGCTC 191
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSST-SGRASCAHCSRAATC 788
R C GCA C GC+R T +G A C + A C
Sbjct: 98 RGKRCVTMNGCACCVTMNGCSRCVTMNGCARCVTMNGCARC 138
>SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1)
Length = 155
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 588 TASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCSRAAGCARSSTSGR 752
T S+ A CR+ + + C W + N G A + A ARS TS +
Sbjct: 13 TGKSTSSTAAACRRATKRSCTPCCWWSSSCNYGYVYGYAKATVGASEARSGTSAK 67
>SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSST-SGRASCAHCSRAATC 788
R C GCA C GCAR T +G A C + A C
Sbjct: 170 RGKRCVTMNGCACCVTMNGCARCVTMNGCARCVTMNGCARC 210
>SB_12112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 550 SKGVMHVHLSTLEQRHANRRTQGVVANV*GQLHCSRAAGCARSTARVPLAARTAR 714
++GV+ VH+S RH+ R + +VA+ C+ A AR VP++AR+ R
Sbjct: 10 ARGVIPVHVSARSWRHSRARQRALVAS----FPCTSAR--ARGVIPVPVSARSWR 58
>SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSST-SGRASCAHCSRAATC 788
R C GCA C GCAR T +G A C + A C
Sbjct: 170 RGKRCVTMNGCACCVTMNGCARCVTMNGCARCVTMNGCARC 210
>SB_34049| Best HMM Match : PSI (HMM E-Value=2.6)
Length = 279
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +3
Query: 681 CSRTAGCAHCSRAAGCARSST-SGRASCA---HCSRAATCAGSP 800
C GCA C GCAR T +G C C+R T G P
Sbjct: 176 CVTMNGCARCVTIYGCARCVTMNGCVRCVTMNGCARCVTMNGCP 219
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 681 CSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
C GCA C GCAR T CA C CA
Sbjct: 158 CVTMNGCARCVIMNGCARCVTMN--GCARCVTIYGCA 192
>SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -3
Query: 775 REQCAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVD 638
RE+ Q+ R + E+ Q RE+ + A +++LSA+ +R A+D
Sbjct: 18 RERQEQEERWQRKEQRQKEERERVEREAKKKELSAKFKRDYGEAID 63
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
R C GC+ C GCAR T CA C CA
Sbjct: 170 RGKRCVTMNGCSCCVTMNGCARCVTMN--DCARCVTIYDCA 208
>SB_12370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 559 VMHVHLSTLEQRHANRRTQGVVANV*GQLHCSR 657
VMHVH ST ++ H + A + Q CSR
Sbjct: 2 VMHVHFSTKKREHVTKANDSYDATLNRQRKCSR 34
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 28.7 bits (61), Expect = 6.1
Identities = 24/90 (26%), Positives = 33/90 (36%)
Frame = +3
Query: 477 RNTLSQFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLA 656
R+ + F + LRPA+ V C PE+PG + R
Sbjct: 166 RSDDNTFASHSACDAALRPAS-VEACNTQTCPPEFPGRSVAPVPLTTGFWARFPVPTWHV 224
Query: 657 CRWLRALNCSRTAGCAHCSRAAGCARSSTS 746
W CS+T G SRA C + +TS
Sbjct: 225 TEWD---TCSKTCGRGSQSRAVFCRKKTTS 251
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 2/101 (1%)
Frame = +3
Query: 492 QFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLR 671
+F + +L R V++ G AC G + C + + C + + C +
Sbjct: 158 RFSGHQLLELVTRKKRCVTMNGC-ACCVTMNGCSRCVTMNG--CARCVTMNGCARCVTIY 214
Query: 672 AL-NCSRTAGCAHCSRAAGCARSST-SGRASCAHCSRAATC 788
C GCA C GC R T +G C + A C
Sbjct: 215 GCARCVTMNGCARCVTMNGCPRCVTMNGCTCCVTINGCAPC 255
>SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6)
Length = 426
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 257 TSVIILIDAVMTARILDLGVCCNYYRRDHAVCRKSKTPTPQDVSWHSSVEP 409
T ++IL+D ++LD G+ + R + +K+ DVS VEP
Sbjct: 332 TKILILLDVTPDQKMLDEGLAREFVNRIQKLRKKAGLQPVDDVSIVYEVEP 382
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/111 (24%), Positives = 38/111 (34%)
Frame = +3
Query: 489 SQFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWL 668
SQ T+R F+R AAT + A TA+ + A +TA A
Sbjct: 93 SQVRTQRLTAPFIRTAATATAAAAATAAASVAATAAAAATAAATATATTTATAATATAAA 152
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAGSPAXXVXTA 821
A T A + A A + + A+ + A S A TA
Sbjct: 153 TATATGTTTATATVT-ATATATVTAAATATATATATATATTTSTATVTATA 202
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,941,855
Number of Sequences: 59808
Number of extensions: 490695
Number of successful extensions: 1704
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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