Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10n23
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 33 0.25
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 31 1.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 1.0
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 30 1.8
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 30 1.8
U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 29 3.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical pr... 29 4.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 29 4.1
Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical pr... 29 5.4
U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor pro... 29 5.4
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 9.4
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 28 9.4
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 28 9.4
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 799 GEPAQVAAREQCAQDARPEVDERAQPAAREQCAQPAVREQL 677
GE A V A+++ Q +AQPAA QPAV EQ+
Sbjct: 251 GEQAPVQAQQETVQQTFEAAPAQAQPAAEYGAQQPAVAEQV 291
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAG 794
R C R C C R C R T R C C C G
Sbjct: 74 RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCG 115
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +3
Query: 555 GGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCSRAAGCAR 734
GG C G C+ CR + T C R C R C C GC
Sbjct: 62 GGGGC-----GCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPC-CCGCGCGCGCCG 115
Query: 735 SSTSGR 752
GR
Sbjct: 116 CGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAG 794
R C R C C R C R T R C C C G
Sbjct: 77 RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCG 118
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +3
Query: 555 GGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCSRAAGCAR 734
GG C G C+ CR + T C R C R C C GC
Sbjct: 65 GGGGC-----GCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPC-CCGCGCGCGCCG 118
Query: 735 SSTSGR 752
GR
Sbjct: 119 CGGGGR 124
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/67 (25%), Positives = 24/67 (35%)
Frame = +3
Query: 558 GDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCSRAAGCARS 737
G C P P SC + C Q ++ T L+ C + C+ GC+
Sbjct: 75 GQTCCPSAPPPCSCGTPG---CMQCVQQTVLVPVTTTTCCKCCQPVCTNACTNGGGCSCG 131
Query: 738 STSGRAS 758
T G S
Sbjct: 132 CTRGGCS 138
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = +3
Query: 534 AATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLACRWLRALNCSRTAGCAHCS 713
++ V +GG C G C G C C R C C C
Sbjct: 54 SSRVKRQGGCGCCGCGCGCCGCGGGGGGGC----------GCCCCRPKCCCCCRRCCTCC 103
Query: 714 RAAGCARSSTSGRASCAHCSRAATCAG 794
R C R T R C C C G
Sbjct: 104 RTCCCTRCCTCCRPCCCGCGCGCGCCG 130
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 705 HCSRAAGCARSSTSGRASCAHCSRAATCAGSPAXXVXTARTA 830
H R SSTS AS + AAT SPA T TA
Sbjct: 761 HSQRPPSMGNSSTSSEASSTSPTNAATATSSPASNRPTTSTA 802
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical protein
ZK1236.3a protein.
Length = 1000
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 705 HCSRAAGCARSSTSGRASCAHCSRAATCAGSPAXXVXTARTA 830
H R SSTS AS + AAT SPA T TA
Sbjct: 951 HSQRPPSMGNSSTSSEASSTSPTNAATATSSPASNRPTTSTA 992
>U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical
protein K02G10.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 775 REQCAQDARPEV-DERAQPAAREQCAQPAVREQLS 674
R+ C D R D AQP CAQP V LS
Sbjct: 87 RKSCVADLRVYAEDNEAQPEVEYACAQPTVERHLS 121
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 684 SRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCA 791
SR GC H S + C R C C+R T A
Sbjct: 545 SRCEGCGHLSHSPKCPRRDVPRDTHCPKCARLKTRA 580
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 669 RALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATC 788
R C R C C R C R T R C C C
Sbjct: 72 RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGC 111
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 657 CRWLRALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAG 794
C R C C C R C R T R C C C G
Sbjct: 84 CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCG 129
>Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical
protein C48D5.2b protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = -3
Query: 766 CAQDARPEVDERAQPAAREQCAQPAVREQLSARSQRHASSAVDLIRWRQRPASADLHDAV 587
C ++A E+DE+ P A + + P++R+Q ++ + + P+ A
Sbjct: 29 CQENA--EIDEKLPPRAFRESSAPSLRQQRLSKEAIYYGTQESCDEKSWTPSMA----CT 82
Query: 586 PGYSGAHASPPSTETVAAGRKNNCAWRSVQN 494
G HAS S V++G N A R N
Sbjct: 83 STSPGIHASTASVRPVSSGSTPNGASRKSAN 113
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 657 CRWLRALNCSRTAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAG 794
C R C C C R C R T R C C C G
Sbjct: 85 CCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCG 130
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -3
Query: 826 VRAVCTXXAGEPAQVAAREQCAQDARPEVDERAQPAAREQCAQ-PAVREQLSAR--SQRH 656
++A+ + A++ A+E+ ++A+ + A+ Q AQ + E+ S + +++
Sbjct: 1232 IQALQAAKDAQTAKLVAQEKAKKEAQEKARREAEAKKEAQLAQLMKIAEERSKKEAAEKK 1291
Query: 655 ASSAVDLIRWRQRPASADLHDAVPGYSGAHASPPSTETVAAGRKNNCAWRSV 500
A A L + + D + + AH + PST A N A S+
Sbjct: 1292 AKEAQRLAAAKLAQQANDQAQMIQWLNAAHYASPSTSNAATLSANLAALASL 1343
>Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical
protein C33D3.1 protein.
Length = 433
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 690 TAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAGSP 800
T C CS++ G + +G C +CS T P
Sbjct: 150 TYECVKCSQSCGAGMKAVNGGMMCVNCSTPKTTYSPP 186
>U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor
protein.
Length = 433
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 690 TAGCAHCSRAAGCARSSTSGRASCAHCSRAATCAGSP 800
T C CS++ G + +G C +CS T P
Sbjct: 150 TYECVKCSQSCGAGMKAVNGGMMCVNCSTPKTTYSPP 186
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Frame = +3
Query: 480 NTLSQFCTERHAQLFLRPAATVSVEGGDACAPEYPGTASCKSADAGRCRQRMRSTALLAC 659
NT C + A + RP V AC G+ S + + G+C+ + T
Sbjct: 363 NTQGVHCEQCIANHWRRPGENYCV----ACGCNEIGSLSTQCDNEGKCQCKPGVTGRFCD 418
Query: 660 RWLRALNCSRTAGCAHCSRAAGCARS-STSGRASCAHCSRAATC 788
+ L T GC +C GC S S + + C S + +C
Sbjct: 419 QCLDGFYDFSTNGCKNC----GCETSGSLNNQPRCDSSSGSCSC 458
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 742 VDERAQPAAREQCAQPAVREQLSARSQRHASSA 644
+D R +P+ RE+ A R + ++RHA SA
Sbjct: 138 LDGRREPSVREEIAANMARARRHLEAERHADSA 170
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 742 VDERAQPAAREQCAQPAVREQLSARSQRHASSA 644
+D R +P+ RE+ A R + ++RHA SA
Sbjct: 138 LDGRREPSVREEIAANMARARRHLEAERHADSA 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,283,036
Number of Sequences: 27780
Number of extensions: 344825
Number of successful extensions: 1087
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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