Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10n20
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.11 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.46 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   3.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.5  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    21   7.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 341 VYQLLLIFCLVYSFHLIYSQCKCKYVIPLFF 249
           VY     F ++++ HL++  C   +V+PLFF
Sbjct: 113 VYYFYYAF-IIFTVHLLFLLCIYYFVVPLFF 142


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
 Frame = +2

Query: 116 GNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNI-----QFQKKTMVSHIYIY 280
           GN   W+    K   G +  R D + TYW +  Q      I        + TM+SH   Y
Sbjct: 190 GNAKHWTGIFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQIATGRYDETRGTMLSHFAYY 249

Query: 281 TD 286
            D
Sbjct: 250 VD 251


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 207 DCQYVSMQSSLN*SIPNPGLQED 139
           +C  +++Q+ L  S+ NP ++ED
Sbjct: 167 ECDEITIQAILEFSVTNPTIKED 189


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 YKLDESYTPSRISIRAGTH 343
           Y LDE   PS+I++  GT+
Sbjct: 246 YWLDEGAPPSKINLGLGTY 264


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 332 LLLIFCLVYSFHLIYSQCKCKYVIPL 255
           +++I CL+    ++++ C C Y I +
Sbjct: 537 IIIIGCLIQFNTIVFAFCYCYYSISI 562



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 329 LLIFCLVYSFHLIYSQCKCKY 267
           ++I CL+    +++S C C Y
Sbjct: 257 IIIGCLIQFNTIVFSFCYCYY 277


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 609 LYYLIVAYCW 580
           L YLIVA CW
Sbjct: 6   LIYLIVACCW 15


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 243 NCMLTKCGSCPSDCQYVSMQSSLN*SIPNPGLQEDK 136
           NC++ K     + CQY   Q  LN  +    +QE++
Sbjct: 127 NCIIDKRQR--NRCQYCRYQKCLNMGMKREAVQEER 160


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 96  DLSYTSGSFSKPAINVFFCLF 34
           DL +++ + +     VFFCLF
Sbjct: 79  DLIFSASANASGVATVFFCLF 99


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 234 LTKCGSCPSDCQYVSMQSSL 175
           LT   SCP + QY+ M   L
Sbjct: 161 LTITASCPMNLQYLPMDRQL 180


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 224 HLVNIQFQKKTMVSHIYIYTDYKLDESYTPSRISIRAGT 340
           +L+    + +  VSH+    +  L E   P  +S  AGT
Sbjct: 256 YLIRTDARGRMDVSHLVEEIERSLREGAAPFMVSATAGT 294


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 253 FFLKLYVNQVWKLSIRLPVCFHA 185
           F + +YV  +   S+ L VCF++
Sbjct: 44  FIIAIYVLTILTSSVTLHVCFNS 66


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 344 FNDLQEIEVIELIEPSGWEMIPI 412
           ++DLQE++ +EL+      + P+
Sbjct: 40  YSDLQEMKYLELVIKEALRLYPL 62


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 YKLDESYTPSRISIRAGTH 343
           Y LDE   PS+I++  G++
Sbjct: 247 YWLDEGAPPSKINLGLGSY 265


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 YKLDESYTPSRISIRAGTH 343
           Y LDE   PS+I++  G++
Sbjct: 247 YWLDEGAPPSKINLGLGSY 265


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 639 EYILSIGKSKLYYLIVAYC 583
           +Y+  +    + YLI +YC
Sbjct: 144 DYVFFVENEPILYLIFSYC 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,883
Number of Sequences: 336
Number of extensions: 4194
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)