Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10n20
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical ...   155   2e-38
Z73972-5|CAA98261.2|  201|Caenorhabditis elegans Hypothetical pr...    97   1e-20
Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical pr...    33   0.20 
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    29   4.3  

>AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical
           protein Y48G1C.12 protein.
          Length = 210

 Score =  155 bits (377), Expect = 2e-38
 Identities = 65/138 (47%), Positives = 94/138 (68%)
 Frame = +2

Query: 110 EVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQKKTMVSHIYIYTDY 289
           ++ + AIW+LSSCK GFGID+L  D +E YWQSDG  PH + ++FQKKT V+ +  Y D+
Sbjct: 26  DISSQAIWALSSCKSGFGIDELLSDSVEKYWQSDGPQPHTILLEFQKKTDVAMMMFYLDF 85

Query: 290 KLDESYTPSRISIRAGTHFNDLQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLS 469
           K DESYTPS+I ++ G+   D+   +     EP GW  I ++D + +P R + +Q+ V+ 
Sbjct: 86  KNDESYTPSKIQVKMGSSHQDIFFRQTQTFNEPQGWTFIDLRDKNGKPNRVFWLQVQVIQ 145

Query: 470 NHQNGRDTHMRQIKVHSP 523
           NHQNGRDTH+R ++V  P
Sbjct: 146 NHQNGRDTHIRHVRVLGP 163


>Z73972-5|CAA98261.2|  201|Caenorhabditis elegans Hypothetical
           protein F15H10.3 protein.
          Length = 201

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 47/146 (32%), Positives = 74/146 (50%)
 Frame = +2

Query: 86  YERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQKKTMVS 265
           ++    +R++   A  SLSS     G+D+L  +  E  W+++   PH     F KKT +S
Sbjct: 16  FKYPSNLRDITEEARISLSSVAHCGGVDELLHESSELAWRTNMSPPHRALFTFSKKTDIS 75

Query: 266 HIYIYTDYKLDESYTPSRISIRAGTHFNDLQEIEVIELIEPSGWEMIPIKDIHDRPIRTY 445
           ++ ++ DY  DESY P  + I  G   ND        + +P GW  IPI D    P+R  
Sbjct: 76  YVMLFLDYSRDESYCPQEVRIDLGDGTNDWWLKMYRRVDQPKGWVKIPIHDAFGNPLRVM 135

Query: 446 MIQIAVLSNHQNGRDTHMRQIKVHSP 523
            +Q+ ++ NH+ GRD  +R  +V  P
Sbjct: 136 SLQMTIMKNHEKGRDCVVRHFRVLGP 161


>Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical
           protein F33H2.2 protein.
          Length = 816

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 195 VSMQSSLN*SIPNPGLQEDKLQIA*LPTSRTVPDLSYTSGSFSKPA 58
           VS  S+L  S PNP L         L TS+T  DLS +SG+ ++ A
Sbjct: 360 VSEDSALRASSPNPSLNNSVESFQSLSTSQTASDLSGSSGTVNRAA 405


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 642 QEYILSIGKSKLYYLIVAYCWN*TVEKFLNLFISKEVGSHGECTLICLMC 493
           Q  +  + K +++ +  A+CWN T +   +LF + E   H  C  +C  C
Sbjct: 386 QNKVEEVSKHQIFRIYTAFCWNYTEKGVFHLFDNNE---HKPC--VCPNC 430


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,644,832
Number of Sequences: 27780
Number of extensions: 364235
Number of successful extensions: 898
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)