Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10n17
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075211-1|AAL68078.1| 437|Drosophila melanogaster AT14778p pro... 103 3e-22
AE014134-925|AAF52255.1| 437|Drosophila melanogaster CG6907-PA ... 103 3e-22
M23560-1|AAA29013.1| 648|Drosophila melanogaster protein ( D.me... 31 1.6
AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1... 31 1.6
AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-P... 31 1.6
AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-P... 31 1.6
AE014297-2503|AAF55539.2| 897|Drosophila melanogaster CG15803-P... 31 2.2
>AY075211-1|AAL68078.1| 437|Drosophila melanogaster AT14778p
protein.
Length = 437
Score = 103 bits (247), Expect = 3e-22
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 8/173 (4%)
Frame = +3
Query: 93 MRSFRKFIDISTHINGTKVKNNLPYV--SSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYS 266
M SFRK + I GT+ + V SSG P LD ++GGG+P GSI ++EED ++
Sbjct: 1 MTSFRKRT-VQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLIEEDRFMTHA 59
Query: 267 KVLFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPC----ALPPEDEKAL-STDAEK- 428
KVL KYF+AEGV E+F+ SLD+ P ++ LP+P ++ + +AL AE
Sbjct: 60 KVLAKYFLAEGVISKQEIFLGSLDDIPAEMLRRLPRPLTDQESMEQSEVQALGDAGAENG 119
Query: 429 MKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDS 587
++IAWRY L V S + GH+F+L +D+ + K TT W DS
Sbjct: 120 LRIAWRYNDLPLVNSEH-ATAKIGHHFNLMEQMDSMMLYNVK----TTLWDDS 167
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 579 QDSTLS-WQTTMRRGKLKSALFHKLLRNIYETVLRSSGTNMLRLAIHSLGSPIW 737
QDS L + +G L +LLRN E+ + + N+ R+ + SLGSP+W
Sbjct: 243 QDSPLQVFHNPRYKGLLND--IQQLLRN--ESFVAGTKNNLCRVCLTSLGSPLW 292
>AE014134-925|AAF52255.1| 437|Drosophila melanogaster CG6907-PA
protein.
Length = 437
Score = 103 bits (247), Expect = 3e-22
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 8/173 (4%)
Frame = +3
Query: 93 MRSFRKFIDISTHINGTKVKNNLPYV--SSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYS 266
M SFRK + I GT+ + V SSG P LD ++GGG+P GSI ++EED ++
Sbjct: 1 MTSFRKRT-VQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLIEEDRFMTHA 59
Query: 267 KVLFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPC----ALPPEDEKAL-STDAEK- 428
KVL KYF+AEGV E+F+ SLD+ P ++ LP+P ++ + +AL AE
Sbjct: 60 KVLAKYFLAEGVISKQEIFLGSLDDIPAEMLRRLPRPLTDQESMEQSEVQALGDAGAENG 119
Query: 429 MKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDS 587
++IAWRY L V S + GH+F+L +D+ + K TT W DS
Sbjct: 120 LRIAWRYNDLPLVNSEH-ATAKIGHHFNLMEQMDSMMLYNVK----TTLWDDS 167
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 579 QDSTLS-WQTTMRRGKLKSALFHKLLRNIYETVLRSSGTNMLRLAIHSLGSPIW 737
QDS L + +G L +LLRN E+ + + N+ R+ + SLGSP+W
Sbjct: 243 QDSPLQVFHNPRYKGLLND--IQQLLRN--ESFVAGTKNNLCRVCLTSLGSPLW 292
>M23560-1|AAA29013.1| 648|Drosophila melanogaster protein (
D.melanogaster antigenMab46F11 (vasa) mRNA, complete
cds. ).
Length = 648
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 324 VTSLDEDPHKITSELPQPCALPPEDEKALSTDAEKMKIAWRYEGLSQVESSFGSNTNFGH 503
++ L EDPH++ PQ C + P E A+ E K A +E ++ +G T+F H
Sbjct: 291 LSKLLEDPHELELGRPQVCIVSPTRELAIQIFNEARKFA--FESYLKIGIVYG-GTSFRH 347
>AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1
protein.
Length = 1395
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 223 PAGIPPPT-IWSKDGIPEDTYGRLFF 149
P GIP PT IW KDG+P D + F
Sbjct: 179 PKGIPEPTLIWIKDGVPLDDLKAMSF 204
>AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-PA,
isoform A protein.
Length = 1395
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 223 PAGIPPPT-IWSKDGIPEDTYGRLFF 149
P GIP PT IW KDG+P D + F
Sbjct: 179 PKGIPEPTLIWIKDGVPLDDLKAMSF 204
>AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-PB,
isoform B protein.
Length = 1429
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 223 PAGIPPPT-IWSKDGIPEDTYGRLFF 149
P GIP PT IW KDG+P D + F
Sbjct: 213 PKGIPEPTLIWIKDGVPLDDLKAMSF 238
>AE014297-2503|AAF55539.2| 897|Drosophila melanogaster CG15803-PA
protein.
Length = 897
Score = 30.7 bits (66), Expect = 2.2
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Frame = +3
Query: 327 TSLDEDPHKITSELPQPCALPPEDEKALSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHN 506
T D DP ++P P P KA S A +++AW+ E N G
Sbjct: 568 TDTDPDPDLDPGQMPTPTNEAPV--KAASPTAASLRVAWKSEFPDSEILVAEINKLSGLG 625
Query: 507 FDLSRYIDADT-IEKSKIQYGTTTWQDSTLSWQTTMRRG-KLKSALFHKL--LRNI 662
L +D + IEK Y + D + Q +R G +L HKL LR+I
Sbjct: 626 ISLEGTVDVECGIEKRPHHYIRSILADGPVGRQGILRPGDELLQVNEHKLQGLRHI 681
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,617,216
Number of Sequences: 53049
Number of extensions: 749530
Number of successful extensions: 2053
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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