BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10n07 (341 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 29 2.9 BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 29 2.9 BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 29 2.9 AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 29 2.9 AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 29 2.9 AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein. 29 3.8 >U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa subunit protein. Length = 469 Score = 29.5 bits (63), Expect = 2.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 283 QIFI*KCVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 QIF C LKF ++P++ + LL+ P + + HVI Sbjct: 299 QIF--DCPRLKFSEIPQRLTALLLPPDPIVINHVI 331 >BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, sub protein. Length = 470 Score = 29.5 bits (63), Expect = 2.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 283 QIFI*KCVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 QIF C LKF ++P++ + LL+ P + + HVI Sbjct: 300 QIF--DCPRLKFSEIPQRLTALLLPPDPIVINHVI 332 >BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, sub protein. Length = 470 Score = 29.5 bits (63), Expect = 2.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 283 QIFI*KCVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 QIF C LKF ++P++ + LL+ P + + HVI Sbjct: 300 QIF--DCPRLKFSEIPQRLTALLLPPDPIVINHVI 332 >AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 1 protein. Length = 470 Score = 29.5 bits (63), Expect = 2.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 283 QIFI*KCVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 QIF C LKF ++P++ + LL+ P + + HVI Sbjct: 300 QIF--DCPRLKFSEIPQRLTALLLPPDPIVINHVI 332 >AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 2 protein. Length = 483 Score = 29.5 bits (63), Expect = 2.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 283 QIFI*KCVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 QIF C LKF ++P++ + LL+ P + + HVI Sbjct: 313 QIF--DCPRLKFSEIPQRLTALLLPPDPIVINHVI 345 >AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein. Length = 170 Score = 29.1 bits (62), Expect = 3.8 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 265 CVLLKFKQVPEKQSELLIDPSYLFMFHVI 179 C LKF ++P++ + LL+ P + + HVI Sbjct: 4 CPRLKFSEIPQRLTALLLPPDPIVINHVI 32 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 42,415,811 Number of Sequences: 237096 Number of extensions: 727915 Number of successful extensions: 1248 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1248 length of database: 76,859,062 effective HSP length: 80 effective length of database: 57,891,382 effective search space used: 1910415606 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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