Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10n03
(243 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071712-1|AAL49334.1| 51|Drosophila melanogaster RH27094p pro... 101 2e-22
AE013599-3798|AAF47154.1| 51|Drosophila melanogaster CG3997-PA... 101 2e-22
AF012422-1|AAB65802.1| 51|Drosophila melanogaster ribosomal pr... 99 9e-22
AY069098-1|AAL39243.1| 415|Drosophila melanogaster GH11618p pro... 27 2.6
AE014134-1341|AAF52558.3| 415|Drosophila melanogaster CG7149-PA... 27 2.6
AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf... 26 6.1
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA... 26 6.1
BT003570-1|AAO39574.1| 614|Drosophila melanogaster LD45290p pro... 26 8.0
AY058496-1|AAL13725.1| 647|Drosophila melanogaster LD03170p pro... 26 8.0
AF255674-1|AAG18329.1| 647|Drosophila melanogaster rho guanine ... 26 8.0
AE014296-1222|AAN12050.1| 600|Drosophila melanogaster CG8606-PB... 26 8.0
AE014296-1221|AAF50584.1| 647|Drosophila melanogaster CG8606-PA... 26 8.0
>AY071712-1|AAL49334.1| 51|Drosophila melanogaster RH27094p
protein.
Length = 51
Score = 101 bits (241), Expect = 2e-22
Identities = 44/51 (86%), Positives = 49/51 (96%)
Frame = +2
Query: 32 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 184
M+AHK+F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51
>AE013599-3798|AAF47154.1| 51|Drosophila melanogaster CG3997-PA
protein.
Length = 51
Score = 101 bits (241), Expect = 2e-22
Identities = 44/51 (86%), Positives = 49/51 (96%)
Frame = +2
Query: 32 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 184
M+AHK+F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51
>AF012422-1|AAB65802.1| 51|Drosophila melanogaster ribosomal
protein 46 protein.
Length = 51
Score = 98.7 bits (235), Expect = 9e-22
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +2
Query: 32 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 184
M+AHK+F IK+KLAKKLKQNR +PQWVR+ TGNTIRYNAKRRHWRRTKLKL
Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLATGNTIRYNAKRRHWRRTKLKL 51
>AY069098-1|AAL39243.1| 415|Drosophila melanogaster GH11618p
protein.
Length = 415
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 240 FF*LYRVFIRLHLTHSQAYNLSFVLL 163
FF ++ VF+ +LTH + YN + L
Sbjct: 156 FFVIWNVFLNFYLTHVEKYNTGVMFL 181
>AE014134-1341|AAF52558.3| 415|Drosophila melanogaster CG7149-PA
protein.
Length = 415
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 240 FF*LYRVFIRLHLTHSQAYNLSFVLL 163
FF ++ VF+ +LTH + YN + L
Sbjct: 156 FFVIWNVFLNFYLTHVEKYNTGVMFL 181
>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
N-deacetylase/N-sulfotransferase homolog protein.
Length = 1048
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 41 HKTFIIKRKLAKKLKQNRPIPQWVR 115
H T ++K L KKL +RPIPQW++
Sbjct: 1020 HNTALVK--LLKKLG-SRPIPQWLK 1041
>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
protein.
Length = 1048
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 41 HKTFIIKRKLAKKLKQNRPIPQWVR 115
H T ++K L KKL +RPIPQW++
Sbjct: 1020 HNTALVK--LLKKLG-SRPIPQWLK 1041
>BT003570-1|AAO39574.1| 614|Drosophila melanogaster LD45290p
protein.
Length = 614
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 154 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFAL 59
P +V+ NS+ C +PL+ V L G F L
Sbjct: 282 PNTVVENSLECCCIFPLKKCKVYEMLPGNFKL 313
>AY058496-1|AAL13725.1| 647|Drosophila melanogaster LD03170p
protein.
Length = 647
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 154 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFAL 59
P +V+ NS+ C +PL+ V L G F L
Sbjct: 315 PNTVVENSLECCCIFPLKKCKVYEMLPGNFKL 346
>AF255674-1|AAG18329.1| 647|Drosophila melanogaster rho guanine
nucleotide exchangefactor 4 protein.
Length = 647
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 154 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFAL 59
P +V+ NS+ C +PL+ V L G F L
Sbjct: 315 PNTVVENSLECCCIFPLKKCKVYEMLPGNFKL 346
>AE014296-1222|AAN12050.1| 600|Drosophila melanogaster CG8606-PB,
isoform B protein.
Length = 600
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 154 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFAL 59
P +V+ NS+ C +PL+ V L G F L
Sbjct: 268 PNTVVENSLECCCIFPLKKCKVYEMLPGNFKL 299
>AE014296-1221|AAF50584.1| 647|Drosophila melanogaster CG8606-PA,
isoform A protein.
Length = 647
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 154 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFAL 59
P +V+ NS+ C +PL+ V L G F L
Sbjct: 315 PNTVVENSLECCCIFPLKKCKVYEMLPGNFKL 346
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,992,852
Number of Sequences: 53049
Number of extensions: 172620
Number of successful extensions: 408
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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