Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10n01
         (385 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA...    30   0.90 
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr...    27   6.3  

>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
           protein.
          Length = 2346

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 45  REVRELRKSNCTLVYTKNEAAQQV-LLENNFTAINADQTAYLKNYKSYRE 191
           +EVREL  SNC L+ T     +Q+ LL  N        T   +  K+Y +
Sbjct: 700 KEVRELTSSNCKLMNTTEFQKEQIELLHKNIGTYKQQVTTLEERTKNYEK 749


>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
           protein.
          Length = 2346

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 45  REVRELRKSNCTLVYTKNEAAQQV-LLENNFTAINADQTAYLKNYKSYRE 191
           +EVR L  SNC L+ T     +Q+ LL  N        T   +  K+Y +
Sbjct: 700 KEVRGLTSSNCKLMNTTEFQKEQIELLHTNIGTYKQQVTTLEERTKNYEK 749


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,522,202
Number of Sequences: 53049
Number of extensions: 247208
Number of successful extensions: 565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)