Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10n01
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical ...    28   2.0  
Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical pr...    27   4.5  
AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical...    27   6.0  
AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical...    27   6.0  
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical...    27   6.0  
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam...    27   6.0  
AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gam...    27   6.0  
U41510-7|AAK39381.2|   76|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +1

Query: 52  CANCANPTALWCTRKTRQLSKFY---WKITLPLLMLTKPPI 165
           C+NC     +WC  +++  S F     KI+L L   TKP +
Sbjct: 25  CSNCVGSGQVWCVEQSQCNSSFVSCSTKISLQLNCPTKPKV 65


>AF101316-1|AAC69231.1|  684|Caenorhabditis elegans Hypothetical
           protein F52F10.3 protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 207 KKSLFIYYLLTYKIWYTSVQIVSVQRH 287
           +K++FI  +LT+ +W  +  I+SV+ H
Sbjct: 207 EKNIFIKIILTFSLWTNAELILSVKEH 233


>Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical
           protein F46B3.17 protein.
          Length = 740

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 14  DRPQHGAAVRTRGARIAQIQLHSGVHEKRGSS 109
           D P H AA +T G R++ I   SG     G S
Sbjct: 92  DHPAHAAAAKTHGTRLSGIAGQSGGAPPSGPS 123


>AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15c protein.
          Length = 903

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 43  NERCANCANPTALWCT 90
           N RCA+C NP++ W +
Sbjct: 630 NGRCADCGNPSSEWAS 645


>AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15b protein.
          Length = 951

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 43  NERCANCANPTALWCT 90
           N RCA+C NP++ W +
Sbjct: 678 NGRCADCGNPSSEWAS 693


>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15a protein.
          Length = 1107

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 43  NERCANCANPTALWCT 90
           N RCA+C NP++ W +
Sbjct: 834 NGRCADCGNPSSEWAS 849


>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
           1B protein.
          Length = 1107

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 43  NERCANCANPTALWCT 90
           N RCA+C NP++ W +
Sbjct: 834 NGRCADCGNPSSEWAS 849


>AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gamma
           1A protein.
          Length = 952

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 43  NERCANCANPTALWCT 90
           N RCA+C NP++ W +
Sbjct: 679 NGRCADCGNPSSEWAS 694


>U41510-7|AAK39381.2|   76|Caenorhabditis elegans Hypothetical
           protein ZC449.4 protein.
          Length = 76

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 78  TLVYTKNEAAQQVLLENNFTAIN 146
           ++VY K E AQ+ L  NNF  IN
Sbjct: 52  SMVYIKKEKAQERLPINNFAPIN 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,745,553
Number of Sequences: 27780
Number of extensions: 139103
Number of successful extensions: 368
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)