Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10m15
(708 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.46
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 1.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 1.8
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.8
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 23 1.8
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 23 1.8
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.4
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 21 9.8
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 9.8
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 9.8
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 9.8
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 25.4 bits (53), Expect = 0.46
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 361 VKWDSFKCNTHSFK-YRYVHNDTNAKFYNVIDFCKGLEI 474
V WD + NTH +K ++V D+ N +++ K L +
Sbjct: 313 VVWDDTQKNTHMYKGDQWVAFDSPKAISNKVEYAKSLNL 351
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -2
Query: 434 FAFVSLCTYLYLKLCVLHLNESHLTMC 354
+AF+ +L L +C+ + HL C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFC 269
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 66 WTRSRCSIGRTWTGIFFVTLTNKYAHRTAI 155
WTR+ I + G F+ +LTN + A+
Sbjct: 286 WTRNADDISQEEYGEFYKSLTNDWEDHLAV 315
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 557 PNAISTRWAHC 589
PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 557 PNAISTRWAHC 589
PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 519 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 385
N+I + + + YVV K VEF +++V S L+T+ +
Sbjct: 353 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 397
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 519 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 385
N+I + + + YVV K VEF +++V S L+T+ +
Sbjct: 78 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 122
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 21 ERPYVCTFRICKIQTWTRS 77
ERP+VC + C + +TRS
Sbjct: 342 ERPFVCNWLFCG-KRFTRS 359
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 508 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQ 603
++ +YH ++ KS D L A+F+ +Q
Sbjct: 220 TNTIYHQENFENYEPKSPEDEELLDAIFSWQQ 251
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.0 bits (42), Expect = 9.8
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 487 ILDCNWDSDQVYHL---NEIIFHKQKSKRDLN 573
+L W S VYHL +EI F ++ DLN
Sbjct: 193 VLGETWTSLSVYHLVEISEIHFDLCQAADDLN 224
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.0 bits (42), Expect = 9.8
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 487 ILDCNWDSDQVYHL---NEIIFHKQKSKRDLN 573
+L W S VYHL +EI F ++ DLN
Sbjct: 189 VLGETWTSLSVYHLVEISEIHFDLCQAADDLN 220
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 445 VIDFCKGLEIAHDDILDCN 501
V DFC+ L+ AH + + N
Sbjct: 308 VKDFCQNLDKAHQESIIMN 326
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,106
Number of Sequences: 336
Number of extensions: 3179
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -