Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10m14
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 132 6e-31
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 132 6e-31
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 132 6e-31
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 132 6e-31
DQ225273-1|ABB04032.1| 130|Homo sapiens ring finger and KH doma... 130 3e-30
DQ225272-1|ABB04031.1| 165|Homo sapiens ring finger and KH doma... 130 3e-30
AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein. 130 3e-30
AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein. 130 3e-30
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 128 1e-29
BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein. 127 2e-29
BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C. ele... 125 1e-28
AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding p... 125 1e-28
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 122 8e-28
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 87 4e-17
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 38 0.022
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.022
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 38 0.022
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 38 0.022
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 35 0.21
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 34 0.28
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 34 0.28
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 34 0.28
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 3.4
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 3.4
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 31 3.4
AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18) ... 30 4.5
S65583-1|AAB28238.2| 265|Homo sapiens SP-10 protein. 29 7.9
M82968-1|AAA36626.1| 265|Homo sapiens sperm protein 10 protein. 29 7.9
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 29 7.9
BC014588-1|AAH14588.1| 265|Homo sapiens acrosomal vesicle prote... 29 7.9
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 29 7.9
AK223335-1|BAD97055.1| 265|Homo sapiens acrosomal vesicle prote... 29 7.9
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 132 bits (320), Expect = 6e-31
Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = +1
Query: 205 VEDQRAFKLXLE-LSMLSLGDNLPASNPLGSPLGFAPPPDDRTXKSQNMTECVPVPSSEH 381
++DQRA +L L+ LS+L L + AS P KS NMTECVPVPSSEH
Sbjct: 28 LDDQRALQLALDQLSLLGLDSDEGASLYDSEP----------RKKSVNMTECVPVPSSEH 77
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREILS 537
VA IVG QGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV A+REI+S
Sbjct: 78 VAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIIS 129
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 172 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 221
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 132 bits (320), Expect = 6e-31
Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = +1
Query: 205 VEDQRAFKLXLE-LSMLSLGDNLPASNPLGSPLGFAPPPDDRTXKSQNMTECVPVPSSEH 381
++DQRA +L L+ LS+L L + AS P KS NMTECVPVPSSEH
Sbjct: 28 LDDQRALQLALDQLSLLGLDSDEGASLYDSEP----------RKKSVNMTECVPVPSSEH 77
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREILS 537
VA IVG QGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV A+REI+S
Sbjct: 78 VAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIIS 129
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 172 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 221
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 132 bits (320), Expect = 6e-31
Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = +1
Query: 205 VEDQRAFKLXLE-LSMLSLGDNLPASNPLGSPLGFAPPPDDRTXKSQNMTECVPVPSSEH 381
++DQRA +L L+ LS+L L + AS P KS NMTECVPVPSSEH
Sbjct: 28 LDDQRALQLALDQLSLLGLDSDEGASLYDSEP----------RKKSVNMTECVPVPSSEH 77
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREILS 537
VA IVG QGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV A+REI+S
Sbjct: 78 VAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIIS 129
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 172 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 221
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 132 bits (320), Expect = 6e-31
Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = +1
Query: 205 VEDQRAFKLXLE-LSMLSLGDNLPASNPLGSPLGFAPPPDDRTXKSQNMTECVPVPSSEH 381
++DQRA +L L+ LS+L L + AS P KS NMTECVPVPSSEH
Sbjct: 28 LDDQRALQLALDQLSLLGLDSDEGASLYDSEP----------RKKSVNMTECVPVPSSEH 77
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREILS 537
VA IVG QGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV A+REI+S
Sbjct: 78 VAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIIS 129
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 172 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 221
>DQ225273-1|ABB04032.1| 130|Homo sapiens ring finger and KH domain
containing 1 protein variant 2 protein.
Length = 130
Score = 130 bits (314), Expect = 3e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 334 KSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVT 513
KS NMTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV
Sbjct: 52 KSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVE 111
Query: 514 RAKREILS 537
AKREILS
Sbjct: 112 MAKREILS 119
>DQ225272-1|ABB04031.1| 165|Homo sapiens ring finger and KH domain
containing 1 protein variant 1 protein.
Length = 165
Score = 130 bits (314), Expect = 3e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 334 KSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVT 513
KS NMTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV
Sbjct: 65 KSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVE 124
Query: 514 RAKREILS 537
AKREILS
Sbjct: 125 MAKREILS 132
>AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein.
Length = 651
Score = 130 bits (314), Expect = 3e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 334 KSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVT 513
KS NMTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV
Sbjct: 175 KSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVE 234
Query: 514 RAKREILS 537
AKREILS
Sbjct: 235 MAKREILS 242
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 285 VGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI 334
>AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein.
Length = 515
Score = 130 bits (314), Expect = 3e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 334 KSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVT 513
KS NMTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV
Sbjct: 39 KSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVE 98
Query: 514 RAKREILS 537
AKREILS
Sbjct: 99 MAKREILS 106
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 149 VGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI 198
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 128 bits (309), Expect = 1e-29
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 334 KSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVT 513
KS N TECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEP+FVVTGRKEDV
Sbjct: 228 KSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVA 287
Query: 514 RAKREILS 537
AKREILS
Sbjct: 288 MAKREILS 295
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 338 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 387
>BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein.
Length = 489
Score = 127 bits (307), Expect = 2e-29
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +1
Query: 343 NMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAK 522
NMTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV AK
Sbjct: 1 NMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAK 60
Query: 523 REILS 537
REILS
Sbjct: 61 REILS 65
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 108 VGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI 157
>BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C.
elegans) protein.
Length = 488
Score = 125 bits (301), Expect = 1e-28
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 346 MTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKR 525
MTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV AKR
Sbjct: 1 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKR 60
Query: 526 EILS 537
EILS
Sbjct: 61 EILS 64
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 107 VGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI 156
>AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding
protein protein.
Length = 488
Score = 125 bits (301), Expect = 1e-28
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 346 MTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKR 525
MTECVPVPSSEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGRKEDV AKR
Sbjct: 1 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKR 60
Query: 526 EILS 537
EILS
Sbjct: 61 EILS 64
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 107 VGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI 156
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 122 bits (294), Expect = 8e-28
Identities = 57/71 (80%), Positives = 62/71 (87%)
Frame = +1
Query: 325 RTXKSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKE 504
R S N TECVPVP+SEHVA IVG QGCKIKALRAKTNTYIKTPVRGEEPVF+VTGR+E
Sbjct: 125 RLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRRE 184
Query: 505 DVTRAKREILS 537
DV A+REI+S
Sbjct: 185 DVATARREIIS 195
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +TNTYI TP R +PVF +TG +V RA+ EI
Sbjct: 235 VGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI 284
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 87.0 bits (206), Expect = 4e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 406 GCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREILS 537
GCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV A+REI+S
Sbjct: 18 GCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIIS 61
Score = 56.0 bits (129), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVTRAKREI 531
V +VG +G IK ++ +T+TYI TP R +EPVF VTG E+V RA+ EI
Sbjct: 104 VGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 153
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 37.9 bits (84), Expect = 0.022
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEP--VFVVTGRKEDVTRAKREI 531
V +P EH ++G G K++ L KT T I+ P R ++P +TG KE + +A+ E+
Sbjct: 155 VAIPK-EHHRFVIGKNGEKLQDLELKTATKIQIP-RPDDPSNQIKITGTKEGIEKARHEV 212
Query: 532 L 534
L
Sbjct: 213 L 213
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 586 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 644
Query: 535 S 537
S
Sbjct: 645 S 645
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 37.9 bits (84), Expect = 0.022
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 301 GFAPPPDDRTXKSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPV 480
G + PP+D + + C + S V ++G G KIK +++ TNT I+ E +
Sbjct: 53 GTSRPPEDVAAGHEELPLCFAL-KSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQPESL 111
Query: 481 FVVTGRKEDVTRAKREI 531
+ G K T+AK I
Sbjct: 112 VKIFGSKAMQTKAKAVI 128
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 37.9 bits (84), Expect = 0.022
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEP--VFVVTGRKEDVTRAKREI 531
V +P EH ++G G K++ L KT T I+ P R ++P +TG KE + +A+ E+
Sbjct: 155 VAIPK-EHHRFVIGKNGEKLQDLELKTATKIQIP-RPDDPSNQIKITGTKEGIEKARHEV 212
Query: 532 L 534
L
Sbjct: 213 L 213
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 586 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 644
Query: 535 S 537
S
Sbjct: 645 S 645
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 37.9 bits (84), Expect = 0.022
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEP--VFVVTGRKEDVTRAKREI 531
V +P EH ++G G K++ L KT T I+ P R ++P +TG KE + +A+ E+
Sbjct: 155 VAIPK-EHHRFVIGKNGEKLQDLELKTATKIQIP-RPDDPSNQIKITGTKEGIEKARHEV 212
Query: 532 L 534
L
Sbjct: 213 L 213
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 586 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 644
Query: 535 S 537
S
Sbjct: 645 S 645
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 34.7 bits (76), Expect = 0.21
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 301 GFAPPPDDRTXKSQNMTECVPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPV 480
G + PP+ + + C + S V ++G G KIK +++ TNT I+ E +
Sbjct: 53 GTSRPPEAVAAGHEELPLCFAL-KSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQPESL 111
Query: 481 FVVTGRKEDVTRAKREI 531
+ G K T+AK I
Sbjct: 112 VKIFGSKAMQTKAKAVI 128
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 216 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 274
Query: 535 S 537
S
Sbjct: 275 S 275
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 83 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 141
Query: 535 S 537
S
Sbjct: 142 S 142
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 34.3 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 VPVPSSEHVAXIVGXQGCKIKALRAKTNTYIKTPV-RGEEPVFVVTGRKEDVTRAKREIL 534
VP+ H I+G G IK +R ++NT I P ++TG++ + A+ IL
Sbjct: 269 VPIFKQFH-KNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRIL 327
Query: 535 S 537
S
Sbjct: 328 S 328
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFV-VTGRKEDVTRAKREI 531
V ++G G KIK L+ TNT I+ + GE V + G +E +AK I
Sbjct: 60 VGVVIGYSGSKIKDLQHSTNTKIQI-INGESEAKVRIFGNREMKAKAKAAI 109
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFV-VTGRKEDVTRAKREI 531
V ++G G KIK L+ TNT I+ + GE V + G +E +AK I
Sbjct: 60 VGVVIGYSGSKIKDLQHSTNTKIQI-INGESEAKVRIFGNREMKAKAKAAI 109
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 382 VAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFV-VTGRKEDVTRAKREI 531
V ++G G KIK L+ TNT I+ + GE V + G +E +AK I
Sbjct: 60 VGVVIGYSGSKIKDLQHSTNTKIQI-INGESEAKVRIFGNREMKAKAKAAI 109
>AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18)
protein.
Length = 403
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 373 SEHVAXIVGXQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGR-KEDVTRAKREI 531
S V IVG +G K + +T T I P G++ V+TG+ + V A+ I
Sbjct: 98 SRQVMHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI 151
>S65583-1|AAB28238.2| 265|Homo sapiens SP-10 protein.
Length = 265
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 231 GSGAEHAEPGRQLAGEQPAGEPARVRASSGRP 326
GSG + + G Q +GEQP+GE A +SG P
Sbjct: 149 GSGEQPS--GEQASGEQPSGEHASGEQASGAP 178
>M82968-1|AAA36626.1| 265|Homo sapiens sperm protein 10 protein.
Length = 265
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 231 GSGAEHAEPGRQLAGEQPAGEPARVRASSGRP 326
GSG + + G Q +GEQP+GE A +SG P
Sbjct: 149 GSGEQPS--GEQASGEQPSGEHASGEQASGAP 178
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 371 PPSTSPRSSDXKGARLKLCERRLTLTSRHR*GARSPCLWSPAARRTSRAPSVR 529
P S S + L +C+ R R R G RSP R+ SR+PS R
Sbjct: 327 PKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR 379
>BC014588-1|AAH14588.1| 265|Homo sapiens acrosomal vesicle protein
1 protein.
Length = 265
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 231 GSGAEHAEPGRQLAGEQPAGEPARVRASSGRP 326
GSG + + G Q +GEQP+GE A +SG P
Sbjct: 149 GSGEQPS--GEQASGEQPSGEHASGEQASGAP 178
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 371 PPSTSPRSSDXKGARLKLCERRLTLTSRHR*GARSPCLWSPAARRTSRAPSVR 529
P S S + L +C+ R R R G RSP R+ SR+PS R
Sbjct: 327 PKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR 379
>AK223335-1|BAD97055.1| 265|Homo sapiens acrosomal vesicle protein
1 isoform a precursor variant protein.
Length = 265
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 231 GSGAEHAEPGRQLAGEQPAGEPARVRASSGRP 326
GSG + + G Q +GEQP+GE A +SG P
Sbjct: 149 GSGEQPS--GEQASGEQPSGEHASGEQASGAP 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,718,482
Number of Sequences: 237096
Number of extensions: 1125042
Number of successful extensions: 3902
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3891
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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