Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10m13
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119211-1|AAM51071.1|  147|Drosophila melanogaster SD15892p pro...    31   1.8  
AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-P...    31   1.8  
AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p pro...    29   4.1  
AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen 5-re...    29   4.1  
AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA...    29   4.1  

>AY119211-1|AAM51071.1|  147|Drosophila melanogaster SD15892p
           protein.
          Length = 147

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
 Frame = +1

Query: 379 SQTPTAVIWRRSNTHGWK-TTNPAEERIKLSLR------TLSSGVCTGAAFP*TKFPCQI 537
           S  PTA  WRRSN  GWK  T+P    + +S +      T     C   A P T+ P  I
Sbjct: 30  STPPTASSWRRSN--GWKRVTSPVHPPVAVSPKKKAAKSTEPPKSCLPKAQP-TRIPTSI 86

Query: 538 YRT-CCTVSYPSAVAME*TTPSKQYPE 615
           + +   + S  S+ +   ++PS Q P+
Sbjct: 87  HSSVSSSSSMSSSCSPSPSSPSPQSPQ 113


>AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-PA
           protein.
          Length = 535

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
 Frame = +1

Query: 379 SQTPTAVIWRRSNTHGWK-TTNPAEERIKLSLR------TLSSGVCTGAAFP*TKFPCQI 537
           S  PTA  WRRSN  GWK  T+P    + +S +      T     C   A P T+ P  I
Sbjct: 418 STPPTASSWRRSN--GWKRVTSPVHPPVAVSPKKKAAKSTEPPKSCLPKAQP-TRIPTSI 474

Query: 538 YRT-CCTVSYPSAVAME*TTPSKQYPE 615
           + +   + S  S+ +   ++PS Q P+
Sbjct: 475 HSSVSSSSSMSSSCSPSPSSPSPQSPQ 501


>AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p
           protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen
           5-related 2 protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA
           protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,712,077
Number of Sequences: 53049
Number of extensions: 671264
Number of successful extensions: 2656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2656
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)