Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10m12
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   6.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.0  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.0  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   9.0  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 377 LTAETFGFKINANGTSLKKKQIWTLEPASG 466
           LTA      I+  GT L KK    LEP  G
Sbjct: 565 LTAPLGAILISVTGTKLLKKTKQQLEPLDG 594


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 290 RHCCVRSL*SFHTRAGLHRRRNAIARSRE 204
           R+CC R    F+ R  L +    +A+S E
Sbjct: 99  RNCCTRQRKDFNPRKHLLKNVTGVAKSGE 127


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 290 RHCCVRSL*SFHTRAGLHRRRNAIARSRE 204
           R+CC R    F+ R  L +    +A+S E
Sbjct: 99  RNCCTRQRKDFNPRKHLLKNVTGVAKSGE 127


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +2

Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIW--TLEPASGNANDSMIYLRSHLDKYL 517
           G IN  Y YL    +   ++     +K+K +   +L    G  +D  + LR   D+ +
Sbjct: 30  GAINDLYEYLLQREYAAPVSYADHQIKRKAVRSPSLRLRFGRRSDPSVPLRPEEDELI 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,624
Number of Sequences: 2352
Number of extensions: 12187
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)