Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10m12
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09873-1|AAA62201.1| 493|Homo sapiens actin bundling protein pr... 117 3e-26
U03057-1|AAA86442.1| 493|Homo sapiens actin bundling protein pr... 117 3e-26
BT006636-1|AAP35282.1| 493|Homo sapiens fascin homolog 1, actin... 117 3e-26
BC007988-1|AAH07988.1| 493|Homo sapiens fascin homolog 1, actin... 117 3e-26
BC007948-1|AAH07948.1| 493|Homo sapiens FSCN1 protein protein. 117 3e-26
BC007539-1|AAH07539.1| 500|Homo sapiens FSCN1 protein protein. 117 3e-26
BC006304-1|AAH06304.1| 493|Homo sapiens fascin homolog 1, actin... 117 3e-26
BC000521-1|AAH00521.1| 493|Homo sapiens fascin homolog 1, actin... 117 3e-26
AY044229-1|AAL01526.1| 493|Homo sapiens fascin protein. 117 3e-26
BC130330-1|AAI30331.1| 492|Homo sapiens fascin homolog 2, actin... 103 6e-22
BC126295-1|AAI26296.1| 492|Homo sapiens fascin homolog 2, actin... 103 6e-22
AF066065-1|AAC18604.1| 492|Homo sapiens retinal fascin protein. 103 6e-22
AF030165-1|AAB86481.1| 492|Homo sapiens retinal fascin protein. 103 6e-22
BC035606-1|AAH35606.1| 498|Homo sapiens fascin homolog 3, actin... 39 0.019
AF281049-1|AAF91439.1| 498|Homo sapiens testis fascin protein. 39 0.019
BC007643-1|AAH07643.1| 411|Homo sapiens Similar to singed (Dros... 31 5.0
>U09873-1|AAA62201.1| 493|Homo sapiens actin bundling protein
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>U03057-1|AAA86442.1| 493|Homo sapiens actin bundling protein
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BT006636-1|AAP35282.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BC007988-1|AAH07988.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BC007948-1|AAH07948.1| 493|Homo sapiens FSCN1 protein protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BC007539-1|AAH07539.1| 500|Homo sapiens FSCN1 protein protein.
Length = 500
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 22 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 81
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 82 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 130
>BC006304-1|AAH06304.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BC000521-1|AAH00521.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>AY044229-1|AAL01526.1| 493|Homo sapiens fascin protein.
Length = 493
Score = 117 bits (282), Expect = 3e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GLIN +YLTAE FGFK+NA+ +SLKKKQIWTLE A + + LRSHL +YLA D
Sbjct: 15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK 74
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
GNVTCE E P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 75 DGNVTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 123
>BC130330-1|AAI30331.1| 492|Homo sapiens fascin homolog 2,
actin-bundling protein, retinal (Strongylocentrotus
purpuratu protein.
Length = 492
Score = 103 bits (247), Expect = 6e-22
Identities = 50/111 (45%), Positives = 67/111 (60%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GL+N RYLTAE+FGFK+NA+ SLK+KQ W LEP G +++ SHL +YL+ +
Sbjct: 15 GLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGT-AVLLRSSHLGRYLSAEE 73
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V CE+E +PG V GRW LR+ G F G + D+L+C A
Sbjct: 74 DGRVACEAE--QPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFA 122
>BC126295-1|AAI26296.1| 492|Homo sapiens fascin homolog 2,
actin-bundling protein, retinal (Strongylocentrotus
purpuratu protein.
Length = 492
Score = 103 bits (247), Expect = 6e-22
Identities = 50/111 (45%), Positives = 67/111 (60%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GL+N RYLTAE+FGFK+NA+ SLK+KQ W LEP G +++ SHL +YL+ +
Sbjct: 15 GLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGT-AVLLRSSHLGRYLSAEE 73
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V CE+E +PG V GRW LR+ G F G + D+L+C A
Sbjct: 74 DGRVACEAE--QPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFA 122
>AF066065-1|AAC18604.1| 492|Homo sapiens retinal fascin protein.
Length = 492
Score = 103 bits (247), Expect = 6e-22
Identities = 50/111 (45%), Positives = 67/111 (60%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GL+N RYLTAE+FGFK+NA+ SLK+KQ W LEP G +++ SHL +YL+ +
Sbjct: 15 GLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGT-AVLLRSSHLGRYLSAEE 73
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V CE+E +PG V GRW LR+ G F G + D+L+C A
Sbjct: 74 DGRVACEAE--QPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFA 122
>AF030165-1|AAB86481.1| 492|Homo sapiens retinal fascin protein.
Length = 492
Score = 103 bits (247), Expect = 6e-22
Identities = 50/111 (45%), Positives = 67/111 (60%)
Frame = +2
Query: 350 GLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVDS 529
GL+N RYLTAE+FGFK+NA+ SLK+KQ W LEP G +++ SHL +YL+ +
Sbjct: 15 GLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGT-AVLLRSSHLGRYLSAEE 73
Query: 530 FGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V CE+E +PG V GRW LR+ G F G + D+L+C A
Sbjct: 74 DGRVACEAE--QPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFA 122
>BC035606-1|AAH35606.1| 498|Homo sapiens fascin homolog 3,
actin-bundling protein, testicular (Strongylocentrotus
purpur protein.
Length = 498
Score = 38.7 bits (86), Expect = 0.019
Identities = 28/112 (25%), Positives = 51/112 (45%)
Frame = +2
Query: 347 IGLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVD 526
+GLI+ YLT E + A SL ++Q W + ++ + +++ L+S YL +
Sbjct: 18 VGLISWAGTYLTFEACKNTVTATAKSLGRRQTWEILVSNEHETQAVVRLKSVQGLYLLCE 77
Query: 527 SFGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V C + + NS +W L+ + G +L S+ + CT+
Sbjct: 78 CDGTV-CYGRPRTSHHGCFLLRFHRNS-KWTLQCLISGRYLESNGKDVFCTS 127
>AF281049-1|AAF91439.1| 498|Homo sapiens testis fascin protein.
Length = 498
Score = 38.7 bits (86), Expect = 0.019
Identities = 28/112 (25%), Positives = 51/112 (45%)
Frame = +2
Query: 347 IGLINSRYRYLTAETFGFKINANGTSLKKKQIWTLEPASGNANDSMIYLRSHLDKYLAVD 526
+GLI+ YLT E + A SL ++Q W + ++ + +++ L+S YL +
Sbjct: 18 VGLISWAGTYLTFEACKNTVTATAKSLGRRQTWEILVSNEHETQAVVRLKSVQGLYLLCE 77
Query: 527 SFGNVTCESEEKEPGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
G V C + + NS +W L+ + G +L S+ + CT+
Sbjct: 78 CDGTV-CYGRPRTSHHGCFLLRFHRNS-KWTLQCLISGRYLESNGKDVFCTS 127
>BC007643-1|AAH07643.1| 411|Homo sapiens Similar to singed
(Drosophila)-like (sea urchin fascin homolog like)
protein.
Length = 411
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 566 PGSKFHISVSDDNSGRWALRNVERGYFLGSSSDKLTCTA 682
P +F I DD GRW+L++ + G + D+L+C A
Sbjct: 5 PDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFA 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,913,132
Number of Sequences: 237096
Number of extensions: 1828189
Number of successful extensions: 4745
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4723
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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