Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10m09
(549 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 27 0.17
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 0.88
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.2
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 2.0
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 23 2.7
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 8.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 8.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.2
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 26.6 bits (56), Expect = 0.17
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 286 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED-LERLKKI 405
KI WFL++ K+I+D Y L +++ +L D L R K+I
Sbjct: 275 KIDKWFLHKMKNIID-YYLVLENTDHTKQLSHDVLLRAKQI 314
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.2 bits (50), Expect = 0.88
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -2
Query: 293 GILYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLI 150
G + +G M+V IF ++ S+ +P+ L A ++ + P++
Sbjct: 63 GFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCMSPPMV 110
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 313 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 411
+ D + QLTSS +S + D +LK IRA
Sbjct: 1781 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1813
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 313 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 411
+ D + QLTSS +S + D +LK IRA
Sbjct: 1777 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1809
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 293 GILYCLGFDMIVIIFSTSSSVHSPARL 213
G + +G M+V IF ++ S+ +P+ L
Sbjct: 29 GFVSVMGNGMVVYIFLSTKSLRTPSNL 55
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 22.6 bits (46), Expect = 2.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 130 PFVCHRCSYS 101
PF C +CSYS
Sbjct: 16 PFKCEKCSYS 25
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 160 VGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITI 264
+G+R S V K A T +E+EKI T+
Sbjct: 3 LGQRISGAVAVLRGTSEVKEAQTSTSDEIEKITTV 37
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 208 DQCRLF*EQCWS 173
D+C EQCWS
Sbjct: 829 DECWRLMEQCWS 840
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 208 DQCRLF*EQCWS 173
D+C EQCWS
Sbjct: 867 DECWRLMEQCWS 878
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 8.2
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 287 LYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIAN 135
+ C+ MI I F+TS ++ R + + T+ L PT ++ A+
Sbjct: 540 MLCIPGYMIYIWFTTSGTISEKFRKLIRIEDDVATLRMKLNPTKAASINAD 590
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 8.2
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 287 LYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIAN 135
+ C+ MI I F+TS ++ R + + T+ L PT ++ A+
Sbjct: 593 MLCIPGYMIYIWFTTSGTISEKFRKLIRIEDNVATLRMKLNPTKAASINAD 643
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,154
Number of Sequences: 438
Number of extensions: 3421
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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