Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10m01
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.17 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.3  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   6.3  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 336 DLNAXMFNCAEIKLNKGQMLFXTKIYRPD 422
           D N       EI LN   +LF  K++RP+
Sbjct: 210 DCNKNTSTSKEIALNNDVLLFFVKVFRPE 238


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 315 NCTKYYSCRTTLQNRRFC 262
           NC  YY CR+ L     C
Sbjct: 571 NCAAYYVCRSGLSYHLSC 588


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/20 (35%), Positives = 8/20 (40%)
 Frame = -3

Query: 321 APNCTKYYSCRTTLQNRRFC 262
           A  C KYY C       + C
Sbjct: 49  AEQCDKYYECNDGQITEKLC 68


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
          protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 7  LLGAAWCKSF 36
          LLGA WC+ +
Sbjct: 10 LLGAVWCEQY 19


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 408 IYRPDNNKTDA 440
           IYRPDN K  A
Sbjct: 32  IYRPDNGKFTA 42


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 408 IYRPDNNKTDA 440
           IYRPDN K  A
Sbjct: 33  IYRPDNGKFTA 43


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 408 IYRPDNNKTDA 440
           IYRPDN K  A
Sbjct: 33  IYRPDNGKFTA 43


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 11  LEPLGVSRFVKFKINCXIN*SKRYYKKNGKHERHYARHRCERP 139
           L P GV    K   +C I    + Y K    + H   H  ERP
Sbjct: 302 LGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERP 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,251
Number of Sequences: 336
Number of extensions: 2134
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)