Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10m01
         (503 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical pr...    31   0.36 
AL117195-4|CAB55010.1|  571|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical
           protein W04D2.2a protein.
          Length = 332

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 220 ILSRWLARRXLXCCTKTPILQCRAATIVFCAIWCKTANTIL 342
           IL+ WLA +    CT   I+      +V CA+WC +  T L
Sbjct: 84  ILTGWLAMKGAVYCTHPNIIYISG--MVVCALWCSSCMTAL 122


>AL117195-4|CAB55010.1|  571|Caenorhabditis elegans Hypothetical
           protein Y57A10A.5 protein.
          Length = 571

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 423 NNKTDAAVNTSSPKRAVETENDDD 494
           ++K+D+   ++SPKRA  +E+DDD
Sbjct: 293 SDKSDSDEYSTSPKRARASESDDD 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,143
Number of Sequences: 27780
Number of extensions: 184233
Number of successful extensions: 458
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)