Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10l20
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.8  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 52  IGLLKPYLKF*NNKVNEKLSNLVYVY 129
           IG+  PYL+   NK  E +++  +VY
Sbjct: 290 IGVRAPYLRVGGNKQFEMMADQFFVY 315


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 52  IGLLKPYLKF*NNKVNEKLSNLVYVY 129
           IG+  PYL+   NK  E +++  +VY
Sbjct: 297 IGVRAPYLRVGGNKQFEMMADQFFVY 322


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +1

Query: 472 KVLD-NRGKVALISCPTLFV 528
           KV++ N G+  +ISCP  FV
Sbjct: 7   KVVEINNGETIIISCPGGFV 26


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/41 (19%), Positives = 18/41 (43%)
 Frame = +1

Query: 388 NILFDENWQLSQFWYDEKTVHSLVKVIDKVLDNRGKVALIS 510
           N+L D  W+ +  WY       +++ +  V+       L++
Sbjct: 77  NVLTDIIWKTTVAWYAGNVACKVIRFLQVVVTYASTYVLVA 117


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 276 VFICFHCTKRC 244
           +F+ F CTK C
Sbjct: 151 IFLSFRCTKLC 161


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 319 FYAEQSKRQEILVKLEADKKLTENILFDENWQLSQ 423
           F A  +K+  + ++++ DK+   N +     +LSQ
Sbjct: 368 FSANSTKKLIVKIRIDIDKEDERNEIISSALKLSQ 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,768
Number of Sequences: 336
Number of extensions: 3617
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)