Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10l20
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73428-4|CAH60777.1|  218|Caenorhabditis elegans Hypothetical pr...    96   2e-20
Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical pr...    29   4.3  
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    28   5.7  
U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81139-6|CAH60791.2|  358|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z73428-4|CAH60777.1|  218|Caenorhabditis elegans Hypothetical
           protein M142.8 protein.
          Length = 218

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 9/157 (5%)
 Frame = +1

Query: 259 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDE 438
           M   +D+P LSA+T AAL  F AEQ   QE + +L++   + E I  DE+WQLSQFWYD+
Sbjct: 1   MSDTDDIPQLSADTLAALSMFQAEQ---QEKIEQLQSG--IIEKI--DEDWQLSQFWYDD 53

Query: 439 KTVHSLV-KVIDKVLDNR----GKVALISCPTL---FVPLKRQIGDRGTVTLLEYDRRFE 594
           +T   LV + +   L+       ++  +S PTL   F   +     +  +TL E+D RF 
Sbjct: 54  ETSRKLVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFG 113

Query: 595 VHGP-DYIFYDYNNPKEVPPDVHHSYDLVVADPPFLS 702
           +  P +++ YDY +P ++P ++   +D+++ADPPFL+
Sbjct: 114 LKFPTEFVHYDYKHPTDLPAELLAKFDVIIADPPFLA 150


>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
 Frame = +1

Query: 418 SQFWYDEKTVHSLVKVIDKVLDNRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEV 597
           SQF++  +T+  + K ++K       +  I  P +F  + R +     V LL+YD+RF  
Sbjct: 212 SQFFFSTETLDVITKAVEK--SKVDGILCIGAPRIFENI-RALHPEKNVFLLDYDKRFAK 268

Query: 598 HGP--DYIFY----DYNNPKEVPPDVHHSYD-----LVVADPPF 696
             P   Y  Y    D+   K   P +   +D     L++ DPPF
Sbjct: 269 FFPSKQYAQYSMLVDHFFDKIAEPKLMEFFDKSKSILMITDPPF 312


>Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical
           protein ZK863.4 protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 472 YQLL*LESVPFSHHTKIDSVANFHQTKYSQLIFYPLLALQGF 347
           + +L +ES+  ++    DS+A       ++++F PLL L GF
Sbjct: 65  FMILQMESIDEANRICHDSIAKGFAINNTKIVFTPLLGLNGF 106


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
            protein R05D3.1 protein.
          Length = 1053

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +1

Query: 331  QSKRQEILVKLEADKKLTEN-ILFDENWQLSQFWYDEKTVHSLVKVIDKVLDNRGKVALI 507
            Q    ++L   +    LTEN +LFD N +L +F    +      +V   + + R K+   
Sbjct: 875  QKSNSDLLNYFKLRTSLTENRVLFDRNGELKEFGNISEIAAEFFEVRRDLYEKRLKIQKE 934

Query: 508  SCPTLFVPLKRQI 546
             C    + ++ Q+
Sbjct: 935  ECEAKLIYVENQL 947


>U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical
           protein C06A5.6 protein.
          Length = 691

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
 Frame = +1

Query: 400 DENWQLSQFWYDEKTVHSLVKVIDKVLDNRGKVALISCP-------TLFVPLKRQIGDRG 558
           D N Q+++F+ D+    S V  +    D+RG   +  CP       T+ + +K  IG R 
Sbjct: 229 DLNGQINEFYKDKVKRKSGVHALIYKKDDRGDKLIFDCPSILGTSMTMALEIKDVIGHRS 288

Query: 559 TV----TLLEYDRRFEVHGPDYIFYDYNN 633
                 T L YD       P     D+N+
Sbjct: 289 VAENDPTALSYDELVSKQLPTVDIDDHNS 317


>Z81139-6|CAH60791.2|  358|Caenorhabditis elegans Hypothetical
           protein W05H5.8 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 487 CCLIPYQLL*LE-SVPFSHHTKIDSVANFHQTKYSQLIFYPLLALQGFLVFYFV 329
           C +I Y+L  L+  VP   HT I +         S L    L+ L GFL +Y++
Sbjct: 83  CIVIGYRLNFLKIDVPIGEHTNIWTEDIAKMLNVSSLKGLELMLLSGFLQWYYM 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,192
Number of Sequences: 27780
Number of extensions: 316599
Number of successful extensions: 781
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)