Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10l20
(706 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g58470.1 68416.m06517 expressed protein several hypothetical ... 109 2e-24
At2g44800.1 68415.m05575 oxidoreductase, 2OG-Fe(II) oxygenase fa... 31 0.98
At5g61720.1 68418.m07744 expressed protein predicted protein, Ar... 30 1.7
At5g60010.1 68418.m07525 ferric reductase-like transmembrane com... 29 2.3
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ... 29 2.3
At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 4.0
At4g33300.1 68417.m04737 disease resistance protein (CC-NBS-LRR ... 28 5.2
At1g32930.1 68414.m04056 galactosyltransferase family protein co... 28 5.2
At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein ... 28 6.9
At1g61850.1 68414.m06979 patatin family protein similar to membr... 28 6.9
At1g59670.1 68414.m06711 glutathione S-transferase, putative sim... 27 9.2
>At3g58470.1 68416.m06517 expressed protein several hypothetical
proteins - Saccharomyces cerevisiae
Length = 248
Score = 109 bits (262), Expect = 2e-24
Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 6/151 (3%)
Frame = +1
Query: 268 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLE--ADKKLTENI-LFDENWQLSQFWYDE 438
D+D LS++ AAL+EF A+Q+K A + ++ + L E+W+LSQFWY+
Sbjct: 24 DDDPLVLSSQALAALREFLADQNKTVASTPPASSVAGGEESDKVELVTEDWRLSQFWYEP 83
Query: 439 KTVHSLVKVIDKVLDNR---GKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPD 609
+T ++ + L R +VA I+CPTL+V LK++ V LLEYD RFE +G +
Sbjct: 84 ETAETVADEV-VTLSQRIPGCRVACIACPTLYVYLKKRDPSL-QVQLLEYDMRFERYGKE 141
Query: 610 YIFYDYNNPKEVPPDVHHSYDLVVADPPFLS 702
+ FYDYN P+++P + H + ++VADPP+LS
Sbjct: 142 FTFYDYNEPEDLPLQLKHCFHIIVADPPYLS 172
>At2g44800.1 68415.m05575 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to flavonol synthase SP|Q96330
{Arabidopsis thaliana}, SP|Q07512 {Petunia hybrida};
contains Pfam profile PF03171: oxidoreductase,
2OG-Fe(II) oxygenase family
Length = 357
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1
Query: 343 VFYFVQHRIPVKQQMSLLTMWARLHLLPLHKKM 245
++ V HR+ V +++ L+ +A LH LPLHKK+
Sbjct: 280 IYKSVIHRVTVNKEVKRLS-FASLHSLPLHKKI 311
>At5g61720.1 68418.m07744 expressed protein predicted protein,
Arabidopsis thaliana
Length = 390
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 490 GKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDY 612
GK++L C TL V L +GT +L Y + F G DY
Sbjct: 2 GKISLAICLTLLVTLSTVYETQGTFSLPLYLKNFPKLGKDY 42
>At5g60010.1 68418.m07525 ferric reductase-like transmembrane
component family protein similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], respiratory burst oxidase
homolog from Solanum tuberosum [GI:16549089]; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 839
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -1
Query: 370 PLLALQGFLVFYFVQHRIPVKQQMSLLTMWARLHLLPLHKKM*QLILRLNILFWCTERLF 191
P L GF F++ H + + + ++ + + P ++K + L + +LF+ +ERLF
Sbjct: 487 PFNVLAGFNAFWYAHHLLVLAYILLIIHGYYLIIEKPWYQKTTWMYLAVPMLFYASERLF 546
>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
similar to glucan synthase GB:AAD11794 [Filobasidiella
neoformans var. neoformans]
Length = 1931
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 ADEDVPTLS-AETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEK 441
A +V T+ ++ LQEFY ++ + E +K+L E+ F + +L + K
Sbjct: 103 AKREVGTIDRSQDILRLQEFYRLYREKNNVDTLKEEEKQLRESGAFTD--ELERKTVKRK 160
Query: 442 TVHSLVKVIDKVLDNRGK 495
V + +KV+ VL+ K
Sbjct: 161 RVFATLKVLGSVLEQLAK 178
>At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to flavonol synthase 1
[SP|Q96330], gibberellin 20-oxidase [GI:9791186];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 316
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 343 VFYFVQHRIPVKQQMSLLTMWARLHLLPLHKKM 245
++ V HR+ V + L+ +A LH LP+HKK+
Sbjct: 239 IYKSVVHRVTVNKDYKRLS-FASLHSLPMHKKI 270
>At4g33300.1 68417.m04737 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 816
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 280 PTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEKTVHSLV 459
PT+ ++ ++ Q++ + LE KKLT+ +L + W L + + + L
Sbjct: 45 PTIKEIQYSGVELPAHRQAQIGMLFDTLEKGKKLTDKVLSSKRWNLYRQLTLARKMEKLE 104
Query: 460 KVIDKVLDN 486
K I L N
Sbjct: 105 KTISNFLKN 113
>At1g32930.1 68414.m04056 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 282 HIVSRDICCFTGILC*TK*KTRNPCKA 362
HI R +CC T + C K + NPC A
Sbjct: 338 HIDDRSLCCGTPLDCEWKGQAGNPCAA 364
>At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 449
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 280 PTLSAETFAALQEFYAEQSKR--QEILVKLEADKKLTENIL 396
P LS AAL EQ + ++LVKL +D K+ EN++
Sbjct: 157 PELSLLASAALSALTKEQGSQVDPDLLVKLLSDPKIVENLI 197
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 253 CAMEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENW 411
C ME DE P + + AA++EF QS Q V ++LT L DE W
Sbjct: 779 CGMELDETDPAIWLKLEAAIEEFI--QSNPQ---VFKNVCERLTLPFLNDEKW 826
>At1g59670.1 68414.m06711 glutathione S-transferase, putative
similar to glutathione S-transferase GB:AAF29773
GI:6856103 from [Gossypium hirsutum]
Length = 233
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 241 QLILRLNILFWCTERLFHTSKPICCTLDQITIIN 140
+L+L+ N +F L H +KP+C +L+ + I+
Sbjct: 45 ELLLKSNPIFKKVPVLIHNTKPVCVSLNIVEYID 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,784,903
Number of Sequences: 28952
Number of extensions: 280372
Number of successful extensions: 749
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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