Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10l15
         (778 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m...    30   1.5  
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem...    29   2.6  
At2g47520.1 68415.m05931 AP2 domain-containing transcription fac...    29   3.4  
At4g25480.1 68417.m03669 DRE-binding protein (DREB1A) / CRT/DRE-...    28   7.9  
At1g16400.1 68414.m01961 cytochrome P450 family protein similar ...    28   7.9  

>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
           membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
           to SP|O22218 Calcium-transporting ATPase 4, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
           {Arabidopsis thaliana}
          Length = 1030

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 212 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 81
           ++LMVC + +  + V  EGF  G       +  +LL V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAIS 215


>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA11)
           identical to SP|Q9M2L4|ACAB_ARATH Potential
           calcium-transporting ATPase 11, plasma membrane-type (EC
           3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
           thaliana}; strong similarity to calmodulin-stimulated
           calcium-ATPase [Brassica oleracea] GI:1805654
          Length = 1025

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 212 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 81
           ++LMVC + +  + V  EGF  G       +  ++L V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAIS 215


>At2g47520.1 68415.m05931 AP2 domain-containing transcription
           factor, putative
          Length = 171

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 772 RDGVGSRKQIYYGTRRRMGGRWRCD 698
           RDG   RK +Y G R+R  G+W  +
Sbjct: 40  RDGKRERKNLYRGIRQRPWGKWAAE 64


>At4g25480.1 68417.m03669 DRE-binding protein (DREB1A) /
           CRT/DRE-binding factor 3 (CBF3) identical to DREB1A
           GI:3738224 from [Arabidopsis thaliana], DREB1A
           [Arabidopsis thaliana] GI:3660548, CRT/DRE binding
           factor 3 [Arabidopsis thaliana] GI:4091983; contains
           Pfam profile PF00847: AP2 domain; identical to cDNA
           CRT/DRE binding factor 3 (CBF3) GI:4322229
          Length = 216

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 757 SRKQIYYGTRRRMGGRWRCD 698
           +R  IY G RRR  G+W C+
Sbjct: 46  TRHPIYRGVRRRNSGKWVCE 65


>At1g16400.1 68414.m01961 cytochrome P450 family protein similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family; identical
           to cytochrome P450 CYP79F2 (CYP79F2) GI:10946207
          Length = 537

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 361 IETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKN 504
           IE  N++ ++ S+Y  +  V V E   V G+    R++FG + +  +N
Sbjct: 165 IEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKEN 212


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,144,991
Number of Sequences: 28952
Number of extensions: 289604
Number of successful extensions: 742
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)