Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10l08
(669 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09100.2 68416.m01070 mRNA capping enzyme family protein simi... 73 1e-13
At3g09100.1 68416.m01071 mRNA capping enzyme family protein simi... 73 1e-13
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 72 3e-13
At5g28210.1 68418.m03416 mRNA capping enzyme family protein simi... 67 9e-12
At5g39400.1 68418.m04773 pollen specific phosphatase, putative /... 42 5e-04
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 31 0.52
At5g23720.2 68418.m02781 dual specificity protein phosphatase fa... 31 0.92
At5g23720.1 68418.m02780 dual specificity protein phosphatase fa... 31 0.92
At3g19420.1 68416.m02463 expressed protein 31 0.92
At5g45170.1 68418.m05545 CbbY protein-related low similarity to ... 29 2.8
At3g23610.1 68416.m02970 dual specificity protein phosphatase (D... 29 3.7
At3g45630.1 68416.m04928 RNA recognition motif (RRM)-containing ... 28 6.5
At2g11370.1 68415.m01220 hypothetical protein 28 6.5
At3g06110.2 68416.m00702 dual specificity protein phosphatase fa... 27 8.5
At2g27500.2 68415.m03325 glycosyl hydrolase family 17 protein si... 27 8.5
At2g27500.1 68415.m03324 glycosyl hydrolase family 17 protein si... 27 8.5
>At3g09100.2 68416.m01070 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF00782: Dual specificity phosphatase
catalytic domain
Length = 672
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +2
Query: 185 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFIDTVEEFTE--KCP 355
+G +IDLTNT++YY + G+ + KI G+ +P V F++ V +F K
Sbjct: 137 LGLVIDLTNTTRYYSTTDLKKEGIKHVKIACKGRDAVPDNVSVNAFVNEVNQFVLNLKHS 196
Query: 356 GMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYV 511
+ VHCTHG NRTG+M+ YLM + + +A+ F AR I + +Y+
Sbjct: 197 KKYILVHCTHGHNRTGFMIVHYLMRSGPMNVTQALKIFSDARPPGIYKPDYI 248
>At3g09100.1 68416.m01071 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF00782: Dual specificity phosphatase
catalytic domain
Length = 471
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +2
Query: 185 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFIDTVEEFTE--KCP 355
+G +IDLTNT++YY + G+ + KI G+ +P V F++ V +F K
Sbjct: 137 LGLVIDLTNTTRYYSTTDLKKEGIKHVKIACKGRDAVPDNVSVNAFVNEVNQFVLNLKHS 196
Query: 356 GMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYV 511
+ VHCTHG NRTG+M+ YLM + + +A+ F AR I + +Y+
Sbjct: 197 KKYILVHCTHGHNRTGFMIVHYLMRSGPMNVTQALKIFSDARPPGIYKPDYI 248
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 72.1 bits (169), Expect = 3e-13
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +2
Query: 185 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFIDTVEEFT--EKCP 355
+G +IDLTNT++YY + + G+ + KI G+ +P V F++ V +F +K
Sbjct: 119 LGLVIDLTNTTRYYPTLDLKKDGIKHVKIACRGRDAVPDNVSVNTFVNEVLQFVLNQKHA 178
Query: 356 GMLVGVHCTHGINRTGYMVCRYLMHTL-GIAPQEAINRFEKARGHKIERQNYV 511
V VHCTHG NRTG+M+ YLM ++ + +A+ F AR I + +Y+
Sbjct: 179 KKYVLVHCTHGHNRTGFMIVHYLMRSMPTMNVTQALKLFSDARPPGIYKPDYI 231
>At5g28210.1 68418.m03416 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 625
Score = 67.3 bits (157), Expect = 9e-12
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 185 IGAIIDLTNTSKYYDGVHFLRAGLL-YKKIQVPGQ-TLPSESIVQEFIDTVEEF-TEKCP 355
IG +IDLTNT++YY LR + Y KI+ G+ ++P V F+ V +F
Sbjct: 95 IGLVIDLTNTTRYYHPNTELRQNRIEYVKIRCSGRDSVPDNVSVNTFVHEVTQFENHNLS 154
Query: 356 GMLVGVHCTHGINRTGYMVCRYLMHTLG-IAPQEAINRFEKARGHKIERQNYV 511
+ VHCTHG NRTG+M+ YLM + ++ +A+ F AR I + +Y+
Sbjct: 155 EKYLLVHCTHGHNRTGFMIVHYLMRSRPMMSVTQALKIFSDARPPGIYKPDYI 207
>At5g39400.1 68418.m04773 pollen specific phosphatase, putative /
phosphatase and tensin, putative (PTEN1) identical to
phosphatase and tensin homolog [Arabidopsis thaliana]
GI:21535746
Length = 412
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 290 LPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRF 469
+PS ++Q F ++V + P + VHC G RTG MV YL++ G++ +EA+ +
Sbjct: 123 VPSLKMIQLFCESVHSWLSLDPKNIAVVHCMAGKGRTGLMVSAYLVYG-GMSAEEALEMY 181
Query: 470 EKAR 481
R
Sbjct: 182 ASRR 185
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAP--QEAINR 466
P ++ F + + ++ +V VHC G+ RTG M+C L++ L P +EAI+
Sbjct: 279 PPIQLIPSFCQSAYTWLKEDIQNVVVVHCKAGMARTGLMICCLLLY-LKFFPTAEEAIDY 337
Query: 467 FEKAR 481
+ + R
Sbjct: 338 YNQKR 342
>At5g23720.2 68418.m02781 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain; contains TG
acceptor splice site at intron 9
Length = 845
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 299 ESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEK 475
ESI QE +D ++ E G + VHC G +R+ +V YLM + EA ++ K
Sbjct: 684 ESIFQEALDFIKHGEET--GGKILVHCFEGRSRSATVVLAYLMLQKKLTLLEAWSKLRK 740
>At5g23720.1 68418.m02780 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain; contains TG
acceptor splice site at intron 9
Length = 929
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 299 ESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEK 475
ESI QE +D ++ E G + VHC G +R+ +V YLM + EA ++ K
Sbjct: 768 ESIFQEALDFIKHGEET--GGKILVHCFEGRSRSATVVLAYLMLQKKLTLLEAWSKLRK 824
>At3g19420.1 68416.m02463 expressed protein
Length = 611
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 293 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 430
P +V F + + ++ +V VHC G+ RTG M+C L++
Sbjct: 235 PPIHLVTSFCQSAYSWLKEDIENVVVVHCKAGMARTGLMICSLLLY 280
>At5g45170.1 68418.m05545 CbbY protein-related low similarity to
SP|P40119 CbbY protein, chromosomal {Alcaligenes
eutrophus}
Length = 372
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 284 QTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHG 388
++LP S VQEFID + EK P +V +C G
Sbjct: 174 KSLPLRSGVQEFIDNA--YAEKVPVAIVTAYCKSG 206
>At3g23610.1 68416.m02970 dual specificity protein phosphatase
(DsPTP1) identical to DsPTP1 protein GI:4150963 from
[Arabidopsis thaliana]; contains Pfam profile: PF00782
dual specificity phosphatase, catalytic domain
Length = 198
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 LYKKIQVPGQTLPS-ESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHT 433
+YK ++V + + E E +D ++E K G V VHC G +R+ +V YLM
Sbjct: 96 VYKVVRVVDKEDTNLEMYFDECVDFIDE--AKRQGGSVLVHCFVGKSRSVTIVVAYLMKK 153
Query: 434 LGIAPQEAINRFEKAR 481
G+ +A+ + R
Sbjct: 154 HGMTLAQALQHVKSKR 169
>At3g45630.1 68416.m04928 RNA recognition motif (RRM)-containing
protein similar to SP|P34909 General negative regulator
of transcription subunit 4 {Saccharomyces cerevisiae};
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 989
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 128 VTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDG 232
V S+ED +T ++I+ + + I TNT +Y G
Sbjct: 218 VGSQEDSFTKDEIISAHTRVQQITGATNTMQYRSG 252
>At2g11370.1 68415.m01220 hypothetical protein
Length = 130
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 125 YVTSEEDVWTTEQ---IVKQNPSIGAIIDLTNTSKYYDGVHFLRAG 253
++ E V TT ++ NPS+G +D T + Y+D + L+ G
Sbjct: 50 FIKDVEAVLTTPDWANLLVLNPSLGTWVDRTTVTLYWDNMRALKRG 95
>At3g06110.2 68416.m00702 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 167
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 LYKKIQVPGQTLPSESIVQEFIDTVEEFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMH 430
+YK I+V + SE+ + + D F ++ G V VHC G++R+ +V YLM
Sbjct: 70 VYKVIEVVDR---SETDLTVYFDECYSFIDQAIQSGGGVLVHCFMGMSRSVTIVVAYLMK 126
Query: 431 TLGIAPQEAINRFEKARGHK 490
G+ +A+ ++R H+
Sbjct: 127 KHGMGFSKAM-ELVRSRRHQ 145
>At2g27500.2 68415.m03325 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 377
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 119 FAYVTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQT 289
FAY S ++V E ++ Q P+ G ++D NT+ +YD + F + LY I+ G T
Sbjct: 207 FAYKDSPKEV-PLEYVLFQ-PNQG-MVD-PNTNLHYDNMLFAQVDALYSAIKTLGHT 259
>At2g27500.1 68415.m03324 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 392
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 119 FAYVTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQT 289
FAY S ++V E ++ Q P+ G ++D NT+ +YD + F + LY I+ G T
Sbjct: 207 FAYKDSPKEV-PLEYVLFQ-PNQG-MVD-PNTNLHYDNMLFAQVDALYSAIKTLGHT 259
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,916,175
Number of Sequences: 28952
Number of extensions: 286287
Number of successful extensions: 714
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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