Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10l07
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal... 154 3e-37
BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal... 153 4e-37
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 32 1.7
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 31 3.0
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 3.9
BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein. 30 9.1
AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology dom... 30 9.1
AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology dom... 30 9.1
AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein. 30 9.1
>AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 variant protein.
Length = 242
Score = 154 bits (373), Expect = 3e-37
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Frame = +3
Query: 141 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 320
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 321 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPIKR 500
LAR L+ + E +KRKQ E+YH AS EE+A IE NP I ++A++NC+P++ L PI +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 501 GGITYQVPGPITEKRSLFLAIKWLL-ETTDEKERTVHFPEQFAWELLEASNNTGKVVKRN 677
GG YQVP P+ ++R FLA+KW++ E D+K + PE+ + +LLEA +N G V+KR+
Sbjct: 164 GGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRS 223
Query: 678 QDLHR 692
DLH+
Sbjct: 224 HDLHK 228
>BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 protein.
Length = 242
Score = 153 bits (372), Expect = 4e-37
Identities = 78/185 (42%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Frame = +3
Query: 141 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 320
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 321 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPIKR 500
LAR L+ + E +KRKQ E+YH AS EE+A IE NP I ++A++NC+P++ L PI +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 501 GGITYQVPGPITEKRSLFLAIKWLL-ETTDEKERTVHFPEQFAWELLEASNNTGKVVKRN 677
GG YQVP P+ ++R FLA+KW++ E D+K + PE+ + +LLEA +N G V+KR
Sbjct: 164 GGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRK 223
Query: 678 QDLHR 692
DLH+
Sbjct: 224 HDLHK 228
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 32.3 bits (70), Expect = 1.7
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Frame = +3
Query: 285 KVINHVMEKGNK----RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYK 452
K I+ V EK N+ + R+ + A ++I+ K +E + +E+ +I + K+ + +
Sbjct: 1518 KQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKR 1577
Query: 453 AVENCKPLLQLQPIKRGGITYQVPGPITE---KRSLFLAIKWLLETTDEKERTVHFPEQF 623
E LQ++ + T ++ + E K FL + + ET ++ H EQF
Sbjct: 1578 VQE----ALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQF 1633
Query: 624 AWELLEASNNTGKVVKRNQDLH 689
+ L N + ++ Q LH
Sbjct: 1634 ETQKLNLENIETENIRLTQILH 1655
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 279 VNKVINHVMEKGNKRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAV 458
+++V +V E + R+ + A ++I+ K +E + +E+ +I + K+ + +
Sbjct: 1540 ISEVQENVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ 1599
Query: 459 ENCKPLLQLQPIKRGGITYQVPGPITE---KRSLFLAIKWLLETTDEKERTVHFPEQFAW 629
E LQ++ + T ++ + E K FL + + ET ++ H EQF
Sbjct: 1600 E----ALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFET 1655
Query: 630 ELLEASNNTGKVVKRNQDLH 689
+ L N + ++ Q LH
Sbjct: 1656 QKLNLENIETENIRLTQILH 1675
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 174 DQVKLIADSDLKNRATVPVKPPTVSETSSVYFDP 275
++V + DS+ + A PV+PP SE S YF P
Sbjct: 538 EEVAMDTDSETSSPAPSPVQPPFFSECSLGYFSP 571
>BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein.
Length = 1192
Score = 29.9 bits (64), Expect = 9.1
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +3
Query: 180 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 359
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 616 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 670
Query: 360 IKRKQIERYHLASTPE 407
K +R H STPE
Sbjct: 671 SKDDVPDRLHAESTPE 686
>AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 9.1
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +3
Query: 180 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 359
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 360 IKRKQIERYHLASTPE 407
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 9.1
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +3
Query: 180 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 359
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 360 IKRKQIERYHLASTPE 407
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein.
Length = 1113
Score = 29.9 bits (64), Expect = 9.1
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +3
Query: 180 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 359
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 537 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 591
Query: 360 IKRKQIERYHLASTPE 407
K +R H STPE
Sbjct: 592 SKDDVPDRLHAESTPE 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,994,893
Number of Sequences: 237096
Number of extensions: 2028763
Number of successful extensions: 8440
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8436
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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