Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10l07
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-45|CAC70123.2| 222|Caenorhabditis elegans Hypothetical p... 108 4e-24
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 36 0.037
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z66500-5|CAA91306.1| 168|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 4.2
U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified vi... 29 4.2
U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified vi... 29 4.2
AC006685-1|AAK84571.1| 154|Caenorhabditis elegans Hypothetical ... 29 4.2
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 28 5.5
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical ... 28 5.5
>Z99281-45|CAC70123.2| 222|Caenorhabditis elegans Hypothetical
protein Y57G11C.34 protein.
Length = 222
Score = 108 bits (259), Expect = 4e-24
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = +3
Query: 138 PDYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGN 317
P +++P+ ++ K + D +N + +K T Y D +++K+I + G
Sbjct: 26 PRVFRDPVTNVQELRKPLDSDDERN--FLFLKAMKSDATPVFYRDHVIDKLIRVCTKDGE 83
Query: 318 KRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPIK 497
K +R+ V A E IKR+Q + + AS EEK IEL+P + K ++NC PL++LQ +
Sbjct: 84 KETSRKNVLSALEIIKRRQYKAWAKASE-EEKKSIELDPFLVAKKGIKNCHPLMKLQGVT 142
Query: 498 RGGITYQVPGPITEKRSLFLAIKWLLE--TTDEKERTVHFPEQFAWELLEASNNTGKVVK 671
RGG TYQVP PI E + F A+K + + K HF + A ELL AS N G ++
Sbjct: 143 RGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRSKHGETHFKDILATELLAASQNEGSTIQ 202
Query: 672 RNQDLHR 692
Q+LH+
Sbjct: 203 AKQELHK 209
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 35.5 bits (78), Expect = 0.037
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 324 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 488
LA+Q +K+FEN ++ ++ R L S P + L D+LY AVE C L
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483
Query: 489 PIK 497
PIK
Sbjct: 484 PIK 486
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
protein ZK328.7a protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.037
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 324 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 488
LA+Q +K+FEN ++ ++ R L S P + L D+LY AVE C L
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483
Query: 489 PIK 497
PIK
Sbjct: 484 PIK 486
>Z66500-5|CAA91306.1| 168|Caenorhabditis elegans Hypothetical
protein T05C12.5 protein.
Length = 168
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 189 IADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFENIKR 368
I+D++ T+ V P ++TS+ + V +E N +L RQL+EK + +K+
Sbjct: 3 ISDTERHQHYTISVCPVLQTDTSTT------SSVAKRQIESKNAQLLRQLIEKKNKKLKK 56
Query: 369 K 371
K
Sbjct: 57 K 57
>Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical
protein JC8.13 protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 36 LIFFYRRLKNSSFNSLTRTLSKLQIRNYAKATSFPDYYQ--NPIFRK--EDQVKLIADSD 203
L F R+L + SFN + +S NY + F D +Q +P+ + D V ++ S
Sbjct: 203 LYLFRRKLPHESFNLIQSIISSFYSSNYRR---FFDIFQQLDPLLKHSLSDCVSILRQSA 259
Query: 204 LKNRATVPVKPPTVSETSSVYFD 272
+KN +V K P S + D
Sbjct: 260 MKN-ISVAFKTPVARLPSQLLSD 281
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 RKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVME-KGNKRLARQLV 341
RK + KL+ + A K + SSV D + + + KRL R
Sbjct: 261 RKRESAKLVEKVLQEEEAAEKRKTEDRVDLSSVLTDDETENMAYEAWKLREMKRLKRNRD 320
Query: 342 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYK 452
E+ ++ ++++ H S E + LNPK I K
Sbjct: 321 EREEAAREKAELDKIHAMSEEERLKYLRLNPKVITNK 357
>U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform b
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 284 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 105
+ E K + R RN+R Y ++ FHL+ +S +W+ + R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269
>U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform a
protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 284 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 105
+ E K + R RN+R Y ++ FHL+ +S +W+ + R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269
>AC006685-1|AAK84571.1| 154|Caenorhabditis elegans Hypothetical
protein T13G4.2 protein.
Length = 154
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 343 RKHSKISKGNKLNDTIWLLHQKKKPK*S*ILRIFYIKPLKIANHCYNYSPSRGV----VS 510
R+ ++ +G KL LL +K+ I R Y +PL +HC+ +PS + S
Sbjct: 33 RRREELGEGEKL-----LLQPQKRG----IERGVYYRPLNFTDHCFKMTPSANIGTMPCS 83
Query: 511 HTRCL 525
H+ C+
Sbjct: 84 HSMCV 88
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
W09D10.2 protein.
Length = 1335
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 212 VLQIRICNEFHLIFFSKYWILIIVW 138
V Q+ I N FHL F +YW + W
Sbjct: 1182 VTQLIIVNTFHLALFVQYWTWPMFW 1206
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 24 MSNVLIFFYRRLKNSSFNSLTRTLSKLQIRNYAKATSFPDY-YQNPIFRKEDQVKLIADS 200
M+N + FF+R + + ++R SK+ + + AT+FP + + R+ D ++A
Sbjct: 1 MNNGVKFFHRNFL--TLHRISRFSSKISQLSISAATTFPSIEIDSKLVRRGDFRGVVASK 58
Query: 201 DLKNRATVP 227
+ KNRA+ P
Sbjct: 59 E-KNRASNP 66
>AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical
protein F59A7.1 protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 562 IAKNNDLFSVIGPGTWYVIPPLLMGCNCNNGLQFSTALYKISLGFN 425
I K ND +S+I W V P G NG S Y + L ++
Sbjct: 399 ITKTNDKYSIID---WQVYPASFNGILTGNGFTLSPVTYSMELQYD 441
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,323,334
Number of Sequences: 27780
Number of extensions: 350323
Number of successful extensions: 1167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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