Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10l06
         (352 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09303 Cluster: Uncharacterized protein F07F6.2; n=1; C...    33   1.8  
UniRef50_Q4Z4H2 Cluster: Putative uncharacterized protein; n=2; ...    31   4.1  
UniRef50_Q2BF15 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_Q4UCW4 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1; Tet...    31   7.2  

>UniRef50_Q09303 Cluster: Uncharacterized protein F07F6.2; n=1;
           Caenorhabditis elegans|Rep: Uncharacterized protein
           F07F6.2 - Caenorhabditis elegans
          Length = 261

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 244 ETGRHHNIFSLREEFVIYHNELILYHQNLILL 149
           ET R +   S RE F+ Y   L+LY QNL+LL
Sbjct: 110 ETSRKYIAISTREMFMYYVELLLLYFQNLLLL 141


>UniRef50_Q4Z4H2 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 872

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -1

Query: 247 FETGRHHNIFSLREEFVIYHNELILYHQNLILL 149
           F  G +HNI++L +E  +Y N+L+ + +  I+L
Sbjct: 618 FSFGPYHNIYNLLDELFLYDNKLLNWFKRWIIL 650


>UniRef50_Q2BF15 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
           protein - Bacillus sp. NRRL B-14911
          Length = 337

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
 Frame = -1

Query: 232 HHNIFSLREEFVIYHNELILYHQNL-ILLRTGVR----VE*NSIELKVNTVLALRTFHEH 68
           HH I SL +EF I  N  IL+ ++L  LL  G++    +  ++   +  T L    FH+ 
Sbjct: 95  HHLIVSLAKEFKIAVNSSILFEEDLKNLLSCGLKPDRLIGWHNFYPRRETGLGESFFHDQ 154

Query: 67  FKIFNSLLRVPFA 29
            K+F S L +P A
Sbjct: 155 NKLFKS-LGIPLA 166


>UniRef50_Q4UCW4 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 1112

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -2

Query: 279 GYVLHLENYVVLRPVDITTYSAYEKSS*F---IITNSYF 172
           G+ L+ ENY++L P D T  S YE SS F   I+T  YF
Sbjct: 24  GFELN-ENYIILEPEDKTLKSTYEISSTFFCRILTLIYF 61


>UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1;
            Tetrahymena thermophila SB210|Rep: Phosphatidylinositol
            4-kinase - Tetrahymena thermophila SB210
          Length = 1748

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 109  KVNTVLALRTFHEHFKIFNSLLRVPFAVSLRVVPI 5
            ++N+   +R  HE    FN+ +RVP+ V++  + I
Sbjct: 1153 QLNSTFIVRIVHEEVTCFNTKMRVPYRVAIETIDI 1187


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,220,552
Number of Sequences: 1657284
Number of extensions: 4769109
Number of successful extensions: 11548
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11545
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)