Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10l02
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23070.1 68416.m02908 expressed protein contains Pfam domain,... 31 0.39
At5g49830.1 68418.m06171 expressed protein 29 2.7
At3g06760.1 68416.m00801 drought-responsive family protein simil... 29 2.7
At5g05180.2 68418.m00552 expressed protein 28 4.8
At5g05180.1 68418.m00551 expressed protein 28 4.8
At3g09780.1 68416.m01161 protein kinase family protein contains ... 28 4.8
At2g27880.1 68415.m03380 argonaute protein, putative / AGO, puta... 28 4.8
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 27 6.3
At4g04525.1 68417.m00658 hypothetical protein 27 6.3
At3g06010.1 68416.m00686 homeotic gene regulator, putative simil... 27 6.3
At1g56430.1 68414.m06490 nicotianamine synthase, putative simila... 27 6.3
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 27 8.3
>At3g23070.1 68416.m02908 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 881
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 124 IDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEED 267
I M A ++ ++EQ+E V D KL+ Y SD + +EED
Sbjct: 763 ISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSDEETDEED 810
>At5g49830.1 68418.m06171 expressed protein
Length = 752
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 184 VNQYLDAPKSEKLEF-VYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYD 360
V + L KS+K + Y S INE+D+K LC + +R +A + ++ A Y
Sbjct: 20 VEEGLSLFKSDKFDADAYVQSKCSINEKDIKQLC---SYLLDLKRASAEEMRRSVYANYP 76
Query: 361 AFIKHSE 381
AFI+ S+
Sbjct: 77 AFIRTSK 83
>At3g06760.1 68416.m00801 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 217
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = -1
Query: 266 SSSFISKSEQLYTNSSFSLLGASKYWFTSSSCST*PLISAAMHNILSI 123
SS++++ ++L + SLLG S + +S++ + PL+S+ M N S+
Sbjct: 108 SSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSV 155
>At5g05180.2 68418.m00552 expressed protein
Length = 408
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/94 (22%), Positives = 47/94 (50%)
Frame = +1
Query: 142 IAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYN 321
+ A+++ + Q++ + + L+ ++ E V + E+LK++ I +
Sbjct: 279 LKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKELEIEVELQSKA 338
Query: 322 APTVLKAQPAVYDAFIKHSELFINAICQMDEKQQ 423
TV + + V++ KH+EL NAI Q +E+++
Sbjct: 339 KKTVEELRATVWE-MEKHAELQRNAISQGEEEKR 371
>At5g05180.1 68418.m00551 expressed protein
Length = 432
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/94 (22%), Positives = 47/94 (50%)
Frame = +1
Query: 142 IAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYN 321
+ A+++ + Q++ + + L+ ++ E V + E+LK++ I +
Sbjct: 303 LKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKELEIEVELQSKA 362
Query: 322 APTVLKAQPAVYDAFIKHSELFINAICQMDEKQQ 423
TV + + V++ KH+EL NAI Q +E+++
Sbjct: 363 KKTVEELRATVWE-MEKHAELQRNAISQGEEEKR 395
>At3g09780.1 68416.m01161 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 775
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 205 PKSEKLEFVYNCSDLDINEEDLKSLCLTKNI 297
P +EK EF +N S L NE DL SLC+ K +
Sbjct: 351 PCNEK-EFAFNASIL--NEPDLTSLCVRKEL 378
>At2g27880.1 68415.m03380 argonaute protein, putative / AGO,
putative similar to SP|O04379 Argonaute protein (AGO1)
{Arabidopsis thaliana}; contains Pfam profiles PF02170:
PAZ domain, PF02171: Piwi domain
Length = 997
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 295 IAYFTERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQ 423
+ YF E+YN +A PA+ +CQ+DE Q+
Sbjct: 432 VQYFAEKYNYRVKYQALPAIQTGSDTRPVYLPMELCQIDEGQR 474
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 142 IAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTE 312
+ DI + ++ +LD+P S ++F N D + E +K I YF E
Sbjct: 85 LQTDISSPLNSFIDIDNFLDSPVSTSVKFGINNDDHVLQPEKSTPFNSSKEIDYFQE 141
>At4g04525.1 68417.m00658 hypothetical protein
Length = 175
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +1
Query: 115 ETAIDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSL 279
E+ +DK+ + ++ Q E ++ V + E+++ Y LD+ ++++KSL
Sbjct: 80 ESLVDKIAALKCSVREQDEHIKFV---VTGSNGERIDPPYMWDRLDLYQQEIKSL 131
>At3g06010.1 68416.m00686 homeotic gene regulator, putative similar
to SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 196 LDAPKSEKLEFVYNCSDLDINEED 267
LDAP+SE L+ + D+DI E D
Sbjct: 372 LDAPRSEPLQDLLPDQDIDITESD 395
>At1g56430.1 68414.m06490 nicotianamine synthase, putative similar
to nicotianamine synthase [Lycopersicon
esculentum][GI:4753801], nicotianamine synthase 2
[Hordeum vulgare][GI:4894912]
Length = 324
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 160 GQVEQLELVNQYLDA-PKSEKLEFVYNCSDLDINEEDLKSLCLTKN 294
G + +LVN+ D K KLE + C D+D + L S C+ N
Sbjct: 2 GYCQDDQLVNKICDLYEKISKLETLKPCEDVDTLFKQLVSTCIPPN 47
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 157 KGQVEQLELVNQYLDAPKSEKLEFVYN 237
K V QLEL+ L PKSE + V N
Sbjct: 222 KSVVHQLELITDLLGTPKSETISGVRN 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,804,676
Number of Sequences: 28952
Number of extensions: 181004
Number of successful extensions: 470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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