Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10l01
         (235 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   5.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   5.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   7.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    19   7.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    19   7.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 5.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 63  YSFCNKFLCL 34
           +SF ++FLCL
Sbjct: 73  FSFMSRFLCL 82


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 19.4 bits (38), Expect = 5.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 63 YSFCNKFLCL 34
          +SF ++FLCL
Sbjct: 29 FSFMSRFLCL 38


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.0 bits (37), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 41  KNLLQNEYTTLQSYK 85
           KNLL+N Y     Y+
Sbjct: 397 KNLLENHYEEFVRYE 411


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.0 bits (37), Expect = 7.0
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 81  YDCNVVYSFCN 49
           Y C + Y  CN
Sbjct: 152 YKCGIQYHICN 162


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.0 bits (37), Expect = 7.0
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 81  YDCNVVYSFCN 49
           Y C + Y  CN
Sbjct: 148 YKCGIQYHICN 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,982
Number of Sequences: 336
Number of extensions: 371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3320999
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)