Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k24
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY351676-1|AAQ62567.1| 419|Homo sapiens galanin receptor-like p... 32 1.7
AY255557-1|AAO85069.1| 145|Homo sapiens G protein-coupled recep... 32 1.7
AB083592-1|BAB89305.1| 419|Homo sapiens putative G-protein coup... 32 1.7
AB065674-1|BAC05899.1| 406|Homo sapiens seven transmembrane hel... 32 1.7
BC110582-1|AAI10583.1| 1006|Homo sapiens mindbomb homolog 1 (Dro... 30 8.8
BC110581-1|AAI10582.1| 1006|Homo sapiens mindbomb homolog 1 (Dro... 30 8.8
BC022403-1|AAH22403.1| 395|Homo sapiens MIB1 protein protein. 30 8.8
AY149908-1|AAN75493.1| 1006|Homo sapiens mind bomb protein. 30 8.8
AY147849-1|AAN18023.1| 997|Homo sapiens MINDBOMB protein. 30 8.8
AK075157-1|BAC11439.1| 286|Homo sapiens protein ( Homo sapiens ... 30 8.8
AB037744-1|BAA92561.1| 396|Homo sapiens KIAA1323 protein protein. 30 8.8
>AY351676-1|AAQ62567.1| 419|Homo sapiens galanin receptor-like
protein protein.
Length = 419
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -1
Query: 545 MLSFGMWILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITGLCWM 366
+L+FG+ + F +FYF W+ K R G+ N+ N ++ V + + + +I+ L W+
Sbjct: 208 LLAFGLPLFFASFYF-WRAYDQCKKR-GTKTQNLR-NQIRSKQVTVMLLSIAIISALLWL 264
>AY255557-1|AAO85069.1| 145|Homo sapiens G protein-coupled receptor
PGR7 protein.
Length = 145
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -1
Query: 545 MLSFGMWILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITGLCWM 366
+L+FG+ + F +FYF W+ K R G+ N+ N ++ V + + + +I+ L W+
Sbjct: 79 LLAFGLPLFFASFYF-WRAYDQCKKR-GTKTQNLR-NQIRSKQVTVMLLSIAIISALLWL 135
>AB083592-1|BAB89305.1| 419|Homo sapiens putative G-protein coupled
receptor protein.
Length = 419
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -1
Query: 545 MLSFGMWILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITGLCWM 366
+L+FG+ + F +FYF W+ K R G+ N+ N ++ V + + + +I+ L W+
Sbjct: 208 LLAFGLPLFFASFYF-WRAYDQCKKR-GTKTQNLR-NQIRSKQVTVMLLSIAIISALLWL 264
>AB065674-1|BAC05899.1| 406|Homo sapiens seven transmembrane helix
receptor protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -1
Query: 545 MLSFGMWILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITGLCWM 366
+L+FG+ + F +FYF W+ K R G+ N+ N ++ V + + + +I+ L W+
Sbjct: 195 LLAFGLPLFFASFYF-WRAYDQCKKR-GTKTQNLR-NQIRSKQVTVMLLSIAIISALLWL 251
>BC110582-1|AAI10583.1| 1006|Homo sapiens mindbomb homolog 1
(Drosophila) protein.
Length = 1006
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 888 ENCA--NLMKKCVQCRAVVERRVPFI 911
>BC110581-1|AAI10582.1| 1006|Homo sapiens mindbomb homolog 1
(Drosophila) protein.
Length = 1006
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 888 ENCA--NLMKKCVQCRAVVERRVPFI 911
>BC022403-1|AAH22403.1| 395|Homo sapiens MIB1 protein protein.
Length = 395
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 277 ENCA--NLMKKCVQCRAVVERRVPFI 300
>AY149908-1|AAN75493.1| 1006|Homo sapiens mind bomb protein.
Length = 1006
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 888 ENCA--NLMKKCVQCRAVVERRVPFI 911
>AY147849-1|AAN18023.1| 997|Homo sapiens MINDBOMB protein.
Length = 997
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 879 ENCA--NLMKKCVQCRAVVERRVPFI 902
>AK075157-1|BAC11439.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ90676 fis, clone PLACE1005682, weakly similar to
B-CELL LYMPHOMA 3-ENCODED PROTEIN. ).
Length = 286
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 168 ENCA--NLMKKCVQCRAVVERRVPFI 191
>AB037744-1|BAA92561.1| 396|Homo sapiens KIAA1323 protein protein.
Length = 396
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 218 QNCVYENLYKKCIMCRAIVRDHEPTV 141
+NC NL KKC+ CRA+V P +
Sbjct: 278 ENCA--NLMKKCVQCRAVVERRVPFI 301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,531,736
Number of Sequences: 237096
Number of extensions: 2173821
Number of successful extensions: 4499
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4499
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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