Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k24
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029262-1|ABK30899.1|  555|Drosophila melanogaster IP02824p pro...    31   1.5  
AE014297-1181|AAF54544.1|  504|Drosophila melanogaster CG6515-PA...    31   1.5  
BT021963-1|AAX94784.2|  840|Drosophila melanogaster LD05244p pro...    29   4.5  
AE014296-808|AAF47871.2|  840|Drosophila melanogaster CG15011-PA...    29   4.5  
BT003220-1|AAO24975.1|  513|Drosophila melanogaster RE02054p pro...    29   7.8  
AY061284-1|AAL28832.1|  513|Drosophila melanogaster LD20239p pro...    29   7.8  
AE013599-3047|AAF57443.3|  513|Drosophila melanogaster CG11175-P...    29   7.8  

>BT029262-1|ABK30899.1|  555|Drosophila melanogaster IP02824p
           protein.
          Length = 555

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -1

Query: 554 IPIMLSFGM-WILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITG 378
           I ++L++G+  I+    Y +   V+W    IG +      + +    V    I +  I  
Sbjct: 257 IILVLTYGIPMIVMLICYSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFA 316

Query: 377 LCWMLFAAFQIYVFKNGHLPTLDVLYRHY 291
           +CW+ +  F IY + N  + +   +   Y
Sbjct: 317 ICWLPYHLFFIYAYHNNQVASTKYVQHMY 345


>AE014297-1181|AAF54544.1|  504|Drosophila melanogaster CG6515-PA
           protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -1

Query: 554 IPIMLSFGM-WILFYTFYFVWKIVVWTKNRIGSSNTNVNFNAEKNFYVAITCIMVNVITG 378
           I ++L++G+  I+    Y +   V+W    IG +      + +    V    I +  I  
Sbjct: 257 IILVLTYGIPMIVMLICYSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFA 316

Query: 377 LCWMLFAAFQIYVFKNGHLPTLDVLYRHY 291
           +CW+ +  F IY + N  + +   +   Y
Sbjct: 317 ICWLPYHLFFIYAYHNNQVASTKYVQHMY 345


>BT021963-1|AAX94784.2|  840|Drosophila melanogaster LD05244p
           protein.
          Length = 840

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 507 LFCMEDCRVDEKSHRLFKHKC 445
           + C+E CR+  K H   KH+C
Sbjct: 480 IVCLELCRITPKCHHAIKHRC 500


>AE014296-808|AAF47871.2|  840|Drosophila melanogaster CG15011-PA
           protein.
          Length = 840

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 507 LFCMEDCRVDEKSHRLFKHKC 445
           + C+E CR+  K H   KH+C
Sbjct: 480 IVCLELCRITPKCHHAIKHRC 500


>BT003220-1|AAO24975.1|  513|Drosophila melanogaster RE02054p
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 419 YVAITCIMVNVITGLCWMLFA 357
           +VA T ++  +++GLCW LFA
Sbjct: 91  FVATTILIHGLVSGLCWPLFA 111


>AY061284-1|AAL28832.1|  513|Drosophila melanogaster LD20239p
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 419 YVAITCIMVNVITGLCWMLFA 357
           +VA T ++  +++GLCW LFA
Sbjct: 91  FVATTILIHGLVSGLCWPLFA 111


>AE013599-3047|AAF57443.3|  513|Drosophila melanogaster CG11175-PA
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 419 YVAITCIMVNVITGLCWMLFA 357
           +VA T ++  +++GLCW LFA
Sbjct: 91  FVATTILIHGLVSGLCWPLFA 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,061,367
Number of Sequences: 53049
Number of extensions: 728281
Number of successful extensions: 1736
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)