Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k22
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    29   0.20 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       27   0.80 
AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    25   1.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.6  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   7.4  

>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +2

Query: 194 LPCVTDQQCRDNCVISSAASELT--CQDGFCNATN---ALLNAQ 310
           LP V DQQCRD   IS+     T    +G CN  +   A+LN Q
Sbjct: 191 LPVVADQQCRDPTGISTGLICFTSPVNNGACNGDSGGPAILNNQ 234


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 142 RWRFQLVNA--HVCILQNKILNKFKRVHVND*YNYQ*NK 32
           R+RF+ +NA  HVC LQ +I +    V  +D ++ Q  K
Sbjct: 282 RFRFRFINAASHVCPLQLQIEDHMMEVIASDSFHLQPRK 320


>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 671 FVKARTSSC*QNLLHFSCKRVYTNWPSDSECTR 573
           FV  RTS+  + LL ++ K   T + +D+EC R
Sbjct: 27  FVALRTSTTNRTLLCWAIKLSPTAYVTDAECVR 59


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -2

Query: 626 FSCKRVYTNWPSDSECTRGSCEPAPFGEIAFFHSRSNIRTRP 501
           F+C RV    P D E   G  E    GEI +    S  R  P
Sbjct: 424 FTCTRVI---PEDCEINNGCMEEITSGEILYAIKNSQSRKSP 462


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 455 CIDKASAFPYRPPSLCTCSRMLE 387
           C+ K  A P  PP    C R LE
Sbjct: 491 CVSKVRAAPPTPPERQRCFRCLE 513


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +2

Query: 230 CVISSAASELTCQDGFCNATNALLNAQAPDLIECD 334
           CV+++    + C    C A N L   + P+    D
Sbjct: 89  CVVNNIKHIIVCGHSDCKAMNLLYKLKDPEFASLD 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,645
Number of Sequences: 2352
Number of extensions: 18016
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)