Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k22
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein.     31   5.7  
AK131574-1|BAD18706.1|  509|Homo sapiens protein ( Homo sapiens ...    30   7.5  
AK131368-1|BAD18519.1|  665|Homo sapiens protein ( Homo sapiens ...    30   7.5  

>AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein.
          Length = 1282

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 16/135 (11%)
 Frame = +2

Query: 170 GVDCSLNRLPCVTDQ-QCRDNCVISSAASELTCQDGF-----------CNATNALLNAQA 313
           G  C   + PC T + Q    C + + ++   CQ G+           C+    L     
Sbjct: 212 GPTCETAQSPCDTKECQHGGQCQVENGSAVCVCQAGYTGAACEMDVDDCSPDPCLNGGSC 271

Query: 314 PDLI---ECDPALGLLHIFSAGGDFVVSQACVST-YRDLVDDTGTPRPYLCNNGRLNMNL 481
            DL+    C  A     +    GD  V  AC+S    +        + Y+C      M L
Sbjct: 272 VDLVGNYTCLCAEPFKGLRCETGDHPVPDACLSAPCHNGGTCVDADQGYVCECPEGFMGL 331

Query: 482 DTVQFSPDACECSSG 526
           D  +  PD CEC +G
Sbjct: 332 DCRERVPDDCECRNG 346


>AK131574-1|BAD18706.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45098 fis, clone BRAWH3031342, moderately
           similar to Zinc finger protein 91. ).
          Length = 509

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -2

Query: 530 HSRSNIRTRPAKIAPCPNSYSADHCCIDKASAFPYRPPSLCT-CSRMLETRQNLRLRRK 357
           H R +   +P K   C  ++ +D C  +         P  C  C ++  T+ NL    K
Sbjct: 276 HRRIHTGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYTCNECGKVFSTKANLACHHK 334


>AK131368-1|BAD18519.1|  665|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16415 fis, clone BRACE3001058, moderately
           similar to Homo sapiens zinc finger protein 347
           (ZNF347). ).
          Length = 665

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -2

Query: 530 HSRSNIRTRPAKIAPCPNSYSADHCCIDKASAFPYRPPSLCT-CSRMLETRQNLRLRRK 357
           H R +   +P K   C  ++ +D C  +         P  C  C ++  T+ NL    K
Sbjct: 432 HRRIHTGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYTCNECGKVFSTKANLACHHK 490


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,301,498
Number of Sequences: 237096
Number of extensions: 2355282
Number of successful extensions: 5875
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5875
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)