Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k20
(218 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98200-2|CAO03367.1| 172|Homo sapiens osteopetrosis associated ... 32 0.29
Z98200-1|CAI19229.1| 334|Homo sapiens osteopetrosis associated ... 32 0.29
BC068581-1|AAH68581.1| 334|Homo sapiens OSTM1 protein protein. 32 0.29
AY358795-1|AAQ89155.1| 334|Homo sapiens HSPC019 protein. 32 0.29
AK075012-1|BAC11351.1| 334|Homo sapiens protein ( Homo sapiens ... 32 0.29
AF533891-1|AAO72749.1| 334|Homo sapiens grey-lethal osteopetros... 32 0.29
BC122560-1|AAI22561.1| 201|Homo sapiens FLJ44955 protein protein. 29 2.7
BC118596-1|AAI18597.1| 201|Homo sapiens FLJ44955 protein protein. 29 2.7
AK126903-1|BAC86744.1| 201|Homo sapiens protein ( Homo sapiens ... 29 2.7
Y15287-1|CAC79687.1| 404|Homo sapiens G-protein coupled recepto... 27 8.2
Y13583-1|CAA73910.1| 404|Homo sapiens G-protein coupled recepto... 27 8.2
BC034761-1|AAH34761.1| 404|Homo sapiens adrenomedullin receptor... 27 8.2
AY268434-1|AAP23201.1| 404|Homo sapiens adrenomedullin receptor... 27 8.2
>Z98200-2|CAO03367.1| 172|Homo sapiens osteopetrosis associated
transmembrane protein 1 protein.
Length = 172
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 46 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 91
>Z98200-1|CAI19229.1| 334|Homo sapiens osteopetrosis associated
transmembrane protein 1 protein.
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 193 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 238
>BC068581-1|AAH68581.1| 334|Homo sapiens OSTM1 protein protein.
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 193 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 238
>AY358795-1|AAQ89155.1| 334|Homo sapiens HSPC019 protein.
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 193 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 238
>AK075012-1|BAC11351.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ90531 fis, clone NT2RP4002451, moderately
similar to Osteopetrosis associated transmembrane
protein 1. ).
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 193 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 238
>AF533891-1|AAO72749.1| 334|Homo sapiens grey-lethal osteopetrosis
protein.
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 211 FNETMQCIEENINPK-------ENSTKVCENCMQSYIQLNNYYESL 95
FN T+ C E N+ +N ++VC+NC ++Y L++ Y +
Sbjct: 193 FNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEM 238
>BC122560-1|AAI22561.1| 201|Homo sapiens FLJ44955 protein protein.
Length = 201
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 187 EENINPKENSTKVCENCMQSYIQL 116
E NINP++N VC C +S QL
Sbjct: 130 ELNINPQDNGENVCRACQRSSQQL 153
>BC118596-1|AAI18597.1| 201|Homo sapiens FLJ44955 protein protein.
Length = 201
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 187 EENINPKENSTKVCENCMQSYIQL 116
E NINP++N VC C +S QL
Sbjct: 130 ELNINPQDNGENVCRACQRSSQQL 153
>AK126903-1|BAC86744.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ44955 fis, clone BRAWH2010619. ).
Length = 201
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 187 EENINPKENSTKVCENCMQSYIQL 116
E NINP++N VC C +S QL
Sbjct: 130 ELNINPQDNGENVCRACQRSSQQL 153
>Y15287-1|CAC79687.1| 404|Homo sapiens G-protein coupled receptor
protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 20 HCYN*CTYRIYNIHAYNIQPYSVKTKRFIIVIQLYVALHTVLTHFGTILFGIYILFNTLH 199
HC C Y + + PY V T + + +++LH L H + + F+ LH
Sbjct: 256 HCLLLCAYVAVFVMCW--LPYHV-TLLLLTLHGTHISLHCHLVHLLYFFYDVIDCFSMLH 312
Query: 200 CFI 208
C I
Sbjct: 313 CVI 315
>Y13583-1|CAA73910.1| 404|Homo sapiens G-protein coupled receptor
protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 20 HCYN*CTYRIYNIHAYNIQPYSVKTKRFIIVIQLYVALHTVLTHFGTILFGIYILFNTLH 199
HC C Y + + PY V T + + +++LH L H + + F+ LH
Sbjct: 256 HCLLLCAYVAVFVMCW--LPYHV-TLLLLTLHGTHISLHCHLVHLLYFFYDVIDCFSMLH 312
Query: 200 CFI 208
C I
Sbjct: 313 CVI 315
>BC034761-1|AAH34761.1| 404|Homo sapiens adrenomedullin receptor
protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 20 HCYN*CTYRIYNIHAYNIQPYSVKTKRFIIVIQLYVALHTVLTHFGTILFGIYILFNTLH 199
HC C Y + + PY V T + + +++LH L H + + F+ LH
Sbjct: 256 HCLLLCAYVAVFVMCW--LPYHV-TLLLLTLHGTHISLHCHLVHLLYFFYDVIDCFSMLH 312
Query: 200 CFI 208
C I
Sbjct: 313 CVI 315
>AY268434-1|AAP23201.1| 404|Homo sapiens adrenomedullin receptor
protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 20 HCYN*CTYRIYNIHAYNIQPYSVKTKRFIIVIQLYVALHTVLTHFGTILFGIYILFNTLH 199
HC C Y + + PY V T + + +++LH L H + + F+ LH
Sbjct: 256 HCLLLCAYVAVFVMCW--LPYHV-TLLLLTLHGTHISLHCHLVHLLYFFYDVIDCFSMLH 312
Query: 200 CFI 208
C I
Sbjct: 313 CVI 315
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,501,228
Number of Sequences: 237096
Number of extensions: 384575
Number of successful extensions: 1084
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -