Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k19
         (226 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   1.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   5.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    19   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    19   5.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    19   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 1.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 145 FY*TVSRRFPKVSIATFPISQSITRNI 65
           FY  V R FP+ S+   P+  + TR +
Sbjct: 325 FYLNVVRPFPERSMGITPMIWNSTRRL 351


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 30  ILLCYTCFRSRSMFRVMDWEIGNVAMETFGN 122
           ILLC    +     R  + + G V  E FG+
Sbjct: 261 ILLCEKVAKEDIQVRFFEEKNGKVVWEGFGD 291


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 ETFGNRLLTV**NRIINLFTCID 176
           + FG  L+ +    I+ L TC++
Sbjct: 237 DVFGTCLILITGKSIVQLLTCLN 259


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 108 ETFGNRLLTV**NRIINLFTCID 176
           + FG  L+ +    I+ L TC++
Sbjct: 237 DVFGTCLILITGKSIVQLLTCLN 259


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 1   EHNNNMIPDGFYCAIHASVRD 63
           + NNN +P     A+   VRD
Sbjct: 107 QQNNNPLPSPRRVAVPVLVRD 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,240
Number of Sequences: 336
Number of extensions: 1099
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  3116485
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)