Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k17
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 367 e-100
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 112 7e-24
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 104 2e-21
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 82 1e-14
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 80 6e-14
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 75 2e-12
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 69 1e-10
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 65 2e-09
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 64 2e-09
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 64 3e-09
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 64 4e-09
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 63 7e-09
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 63 7e-09
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 58 1e-07
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 57 3e-07
UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass etched... 55 1e-06
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 52 2e-05
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 36 0.91
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.2
UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase... 35 1.6
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 35 2.1
UniRef50_Q1HTT9 Cluster: A5L; n=1; Squirrelpox virus|Rep: A5L - ... 35 2.1
UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2; ... 35 2.1
UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,... 34 3.7
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 34 3.7
UniRef50_Q772N1 Cluster: Rh114; n=4; Cytomegalovirus|Rep: Rh114 ... 33 4.9
UniRef50_Q4S5F6 Cluster: Chromosome 19 SCAF14731, whole genome s... 33 6.4
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 33 6.4
UniRef50_UPI0000F2DFA4 Cluster: PREDICTED: hypothetical protein;... 33 8.5
UniRef50_Q3KDF2 Cluster: TonB-dependent siderophore receptor pre... 33 8.5
UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1; Geo... 33 8.5
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 367 bits (902), Expect = e-100
Identities = 184/223 (82%), Positives = 188/223 (84%)
Frame = +2
Query: 14 MEEIVPLVVSAASAIPSLVDAFSSSKPPQTDTPPARSMDMQXXXXXXXXXXXXXXXXXXX 193
MEEIVPLVVSAASAIPSLV+AFSSSKPPQTD P ARSMDMQ
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAP 60
Query: 194 XXXXXXXXXXXXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 373
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE
Sbjct: 61 PPPLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 120
Query: 374 AVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQATLPCDLGY 553
AVVFPSAPSLKIPVTVDLCWTTADVTVEG NVLATPSS+RIT+GGLALMHQATLPCDLGY
Sbjct: 121 AVVFPSAPSLKIPVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGY 180
Query: 554 INPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIR 682
INPIIKSPIPYTNHPRLNIHFHQS DAVLEG+RAGVKASVVIR
Sbjct: 181 INPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASVVIR 223
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 112 bits (270), Expect = 7e-24
Identities = 57/147 (38%), Positives = 84/147 (57%)
Frame = +2
Query: 242 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 421
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 422 DLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPR 601
DLCWT VT +L+ + RI G + LP +L +NP IK + YT+ PR
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLPAELSSLNPTIKDSVTYTDCPR 187
Query: 602 LNIHFHQSPDAVLEGIRAGVKASVVIR 682
L F+++ V G A + S++IR
Sbjct: 188 LTCGFYRNDACVALGSSAPICGSILIR 214
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 104 bits (250), Expect = 2e-21
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
Frame = +2
Query: 242 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 421
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 422 DLCWTTADVTVEGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHP 598
D W ++ V++ G +L+T +R+T GG + + LP DL NP++K + Y N P
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVKDTVSYNNTP 190
Query: 599 RLNIHFHQSPDAVLEGIRAGV-KASVVIR 682
+L + FH++ DA + V S+VIR
Sbjct: 191 KLTVAFHKNTDAPAVSVTTPVIYGSIVIR 219
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/146 (31%), Positives = 75/146 (51%)
Frame = +2
Query: 242 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 421
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 422 DLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPR 601
DL W+T +V +L +R IGG L H L DL Y+NP+IK + Y + P+
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPK 1938
Query: 602 LNIHFHQSPDAVLEGIRAGVKASVVI 679
L ++ + D G A A+V++
Sbjct: 1939 LTLN---ASDPTGSGSTATTVATVLV 1961
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 79.8 bits (188), Expect = 6e-14
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +2
Query: 236 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 415
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 416 TVDLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQ-ATLPCDLGYINPIIKSPIPYTN 592
DL W ++ + +L T +R T+GG +Q + P L +NPIIK + Y +
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQIISFPLRLDSVNPIIKDSVLYLD 150
Query: 593 HPRLNIHFHQSP 628
PRL + F +P
Sbjct: 151 SPRL-LAFSPAP 161
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 245 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 424
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 425 LCWTTADVTVEGGNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPR 601
WT A ++ + + T+GG LM T LP DL +NP++K P+ YT+ PR
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADLTRLNPVLKGPVKYTDCPR 2153
Query: 602 LN 607
+
Sbjct: 2154 FS 2155
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 68.5 bits (160), Expect = 1e-10
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 245 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 424
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 425 LCWTTADVTVEGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHPR 601
L W A T +L T +I++GG + A + +L +NP IK YT+ P+
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGGQVTNSSPAKVSANLLMMNPHIKDSTSYTDTPK 164
Query: 602 LNIHFHQSPDAVLEGIRAGVKASVVI 679
L ++ S AV + AS+++
Sbjct: 165 LLVY---STPAVPDDKLTTSSASIIV 187
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 236 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 415
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 416 TVDLCWTTADVTVEGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTN 592
+V L W + T +L +GG + +PC L INPIIK + YT+
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGGSINSTSPIIVPCPLTNINPIIKDSVTYTD 149
Query: 593 HPRLNIH 613
P+L I+
Sbjct: 150 TPKLLIY 156
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +2
Query: 236 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 415
L +PFQ D TG + + + ++++ YR A L+ +E V P PS P+
Sbjct: 1866 LDLPFQWKVTDFTGYAAYHGTDDLVASAVLTTLCAPYRHAELLYVEISVAPCPPSFSKPI 1925
Query: 416 TVDLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTN 592
+ WT A ++ G +IT+GG ++ T +P DL +NP IKS + Y +
Sbjct: 1926 MFTVVWTPATLSPRDGKETDYYGGRQITVGGPVMLSSTTAVPADLARMNPFIKSSVSYND 1985
Query: 593 HPR 601
PR
Sbjct: 1986 TPR 1988
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +2
Query: 299 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLAT 478
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 479 PSSSRITIGGLALMHQA-TLPCDLGYINPIIKSPIPYTNHPRLNIH 613
R IGG Q +PC+L +N +IK YT+ P+L ++
Sbjct: 112 YGGQRFLIGGTLTTSQVIRVPCNLQSVNAMIKDSTIYTDSPKLLVY 157
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +2
Query: 245 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 424
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 425 LCWTTADVTVEGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHPR 601
+CW A+ V + T IGG + + + C L +NP +K I Y + P+
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPK 152
Query: 602 LNIHFHQSPDA 634
L I P A
Sbjct: 153 LLISITAQPTA 163
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 62.9 bits (146), Expect = 7e-09
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Frame = +2
Query: 242 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 421
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 422 DLCWTTADVTVEGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNH- 595
L W + T ++L IGG + + ++PC+L +NP+IKS +H
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGGAVNSLAAISVPCNLTNVNPVIKSSKLPPSHR 155
Query: 596 ------PRLNIHFHQSP 628
PRL H SP
Sbjct: 156 LFPNSTPRLPAHRSSSP 172
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 62.9 bits (146), Expect = 7e-09
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 242 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 421
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 422 DLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHP 598
WT A + L +T+GG LM T +P DL +NP+IK+ + +T+ P
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFTDCP 2027
Query: 599 R 601
R
Sbjct: 2028 R 2028
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 58.4 bits (135), Expect = 1e-07
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 236 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 415
L IPFQ + + +++ + + + + + + +R + LE V+ P+ + PV
Sbjct: 1912 LTIPFQWVAL-IIKSDSAAFTADLAASTTLKKLTDPFRSCEITQLEVVLMPTLNAFNNPV 1970
Query: 416 TVDLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQ-ATLPCDLGYINPIIKSPIPYTN 592
T+ W + G+ L IT GG M+ AT+P DL INP IKS + Y +
Sbjct: 1971 TLHCVWRVNSIQPASGDELLYYGGQAITAGGPVSMNALATVPADLTRINPRIKSSVGYLD 2030
Query: 593 HPRL 604
PRL
Sbjct: 2031 TPRL 2034
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 275 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 454
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 455 EGGNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSP 628
++L S T GG + LP + +N ++K + Y + P+L + F +P
Sbjct: 104 SPTDILKIYGGSSYTFGGAINSTRPIELPLPINSVNDMLKDSVSYLDTPKLLV-FSPAP 161
>UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass
etched-line virus|Rep: Coat protein - Bermuda grass
etched-line virus
Length = 195
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +2
Query: 284 TKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGG 463
TK + + + ++ + YR A L++ E + P S P+ WT A ++ G
Sbjct: 52 TKHKTDDLSAFTTLAKLTVVYRHAELIHAEVELTPCPGSFSKPLMFLFVWTPASLSPATG 111
Query: 464 NVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNI 610
+ +IT+GG ++ T +P DL +NP+IKS + Y + PR ++
Sbjct: 112 WETSYYGGRQITVGGPVMLSSTTVIPADLSRMNPVIKSSVSYNDCPRWSL 161
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Frame = +2
Query: 236 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 410 PVTVDLCWTTADVTVEGGNVL---ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPI 580
P+TV L W A+ +L S + G ++ +P +L +N ++K +
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSV 148
Query: 581 PYTNHPRL 604
YT+ P+L
Sbjct: 149 TYTDTPKL 156
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 35.9 bits (79), Expect = 0.91
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +2
Query: 266 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 445
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 446 VTVEGGNVLATPSSSRITIGGLALMHQAT 532
+T T + + +T ALM AT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETAT 603
Score = 33.1 bits (72), Expect = 6.4
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 290 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNV 469
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 470 LATPSSSRITIGGLALMHQAT 532
+ T ++ + ALM AT
Sbjct: 722 METATALTVPT-ATALMETAT 741
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 320 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSSSRI 496
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase;
n=29; Eukaryota|Rep: Cytosolic glucose-6-phosphate
isomerase - Porphyra yezoensis
Length = 635
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 515 LMHQA-TLPCD-LGYI---NPIIKSPIPYTNHPRLNIHFHQSPDAVLEG 646
L+H T+PCD +G++ NPI + P +NH L +F PDA+ G
Sbjct: 464 LLHMGQTVPCDFIGFMESQNPICEEGEPVSNHDELVANFFAQPDALANG 512
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 490 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 597
S Y P+ SSHPP + HQ HQ P + HQPP
Sbjct: 420 SGYPVHQTPHPSSHPPHQPP-HQSPHQPPHAPHQPP 454
>UniRef50_Q1HTT9 Cluster: A5L; n=1; Squirrelpox virus|Rep: A5L -
Squirrelpox virus
Length = 659
Score = 34.7 bits (76), Expect = 2.1
Identities = 27/130 (20%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Frame = +2
Query: 239 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIK-GYRDAYLVNLEAVVFPSAPSLKIPV 415
++P RL+ + + T+ + T Q+ P V + K ++ L+ + +P +
Sbjct: 78 VLPHPRLFMNSSETDCYFSPRTCQTPPLVQILSKCAETNSALMRAICLHWPGNDKMTTVA 137
Query: 416 TVDLCWTTADVTVEGGNVLATPSSSRITIG--GLALMHQATLPCDLGYINPIIKSPIPYT 589
++ W +L P++ R+ +G G + CD+GY ++K P+ Y
Sbjct: 138 AINT-WMCRHGLARN-RLLRMPAARRLGLGNTGARTVIDDMTVCDIGYHAILVKDPVRY- 194
Query: 590 NHPRLNIHFH 619
+ P ++I+ H
Sbjct: 195 SRPEIDIYLH 204
>UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 940
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 505 RSRPYASSHPPLRSRLHQPDHQIPDSIHQ 591
R P A+SHPP + H P HQ P HQ
Sbjct: 206 RQHPSATSHPPPTPQHHLPQHQTPSHSHQ 234
>UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,
partial; n=1; Macaca mulatta|Rep: PREDICTED:
hypothetical protein, partial - Macaca mulatta
Length = 180
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 680
PP A S+ S P P + L S+S P+T +F P L PP+SS
Sbjct: 35 PPVTAPSSQFPPVSAPSSQFPRSVPLKSVSAPPVTASSSQFPPSLPPPVSS 85
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 525 KPPSPAISATSTRSSNPRFHTPTTPDL 605
+ P P + TSTR+SNP HTP P L
Sbjct: 29 RKPHPPKATTSTRTSNPAAHTPNQPPL 55
>UniRef50_Q772N1 Cluster: Rh114; n=4; Cytomegalovirus|Rep: Rh114 -
Rhesus cytomegalovirus (strain 68-1) (RhCMV)
Length = 512
Score = 33.5 bits (73), Expect = 4.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +2
Query: 401 LKIPVTVDLCWTTADVTVEGGNVLATPSSSRITIGGLALMHQAT---LPCDLGYINPIIK 571
L IPV LCW TA+ + G LA+ S R++ + M AT L D + I+
Sbjct: 226 LTIPVKSALCWHTAEGGISGPRGLASRISVRLSDATIQNMGPATFGQLYTDTDCPDLILS 285
Query: 572 SPIPY-TNHPRLNIHF----HQSPDAVLEGIRAGVKASVVIR 682
S I Y N R N+ F HQ P + + ++ V R
Sbjct: 286 SLILYQDNILRFNVTFRSAQHQLPSNPIVSFKLRLRQQTVTR 327
>UniRef50_Q4S5F6 Cluster: Chromosome 19 SCAF14731, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 19
SCAF14731, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 842
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGL 662
PP P+IS TS+ +S P P P + +P TP A GL
Sbjct: 709 PPHPSISLTSSSTSTPNPAPPPVPTSAHLQPSPSTPSSSSAANGL 753
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 33.1 bits (72), Expect = 6.4
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = -1
Query: 682 SDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETA 503
S GGF G + RG + G G +RG++DR G G ++G++
Sbjct: 43 SSGGGGFRRGGGNSGGNDRGYNDNRGNGGYSGGRDRGYEDR-GYNNGGGNRGYNNRGDSN 101
Query: 502 NSNARG*RGGQHIASFNCDVSSSPTKVNCDGYFEARGGREN 380
S++RG GG+ +N N GY GG +N
Sbjct: 102 RSDSRGGDGGR--GGYNRQDRGDGGSFN-RGYNNRDGGYDN 139
>UniRef50_UPI0000F2DFA4 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 309
Score = 32.7 bits (71), Expect = 8.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPP 671
PP P S+++ R + P P TP L + P PG +PP
Sbjct: 123 PPPPPPSSSARRDTPPSLPPPPTPGLPRVDAGPTLAAAAATRPGFQPP 170
>UniRef50_Q3KDF2 Cluster: TonB-dependent siderophore receptor
precursor; n=7; Pseudomonas|Rep: TonB-dependent
siderophore receptor precursor - Pseudomonas fluorescens
(strain PfO-1)
Length = 724
Score = 32.7 bits (71), Expect = 8.5
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -2
Query: 531 VA*CIRARPPIVMREDEGVASTLPPSTVTSAVVQQRSTVTGILRLGAEGKTTASRLTRYA 352
+A C+ P + E V T PP+T+ ST G G+E TT + T A
Sbjct: 19 MAICMAVMTPALADETREVQDTAPPATLELGATAITSTQLGSTTEGSESYTTGTMAT--A 76
Query: 351 SR*PFMMEET 322
++ P + ET
Sbjct: 77 TKLPLTLRET 86
>UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1;
Geobacter lovleyi SZ|Rep: Glycosyl transferase, group 1
- Geobacter lovleyi SZ
Length = 283
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 278 TETKSNSVTVQSLPNVSSI--IKGYRDAYLVNLEAVVF 385
TE V SLPN +SI ++GYRD YL + ++F
Sbjct: 63 TEFTGRGFNVISLPNYASIKLLEGYRDDYLTRTDRIIF 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,597,037
Number of Sequences: 1657284
Number of extensions: 12607194
Number of successful extensions: 48051
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 44546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47927
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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