Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k17
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    28   0.24 
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    28   0.24 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   3.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   3.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.9  

>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 299 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 424
           +  + LP+V  ++ G+   +L N  A  FP  P    P+ V+
Sbjct: 247 IIARELPDVDVVVGGHSHTFLYNGTADGFPDDPEDTYPIVVE 288


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 299 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 424
           +  + LP+V  ++ G+   +L N  A  FP  P    P+ V+
Sbjct: 247 IIARELPDVDVVVGGHSHTFLYNGTADGFPDDPEDTYPIVVE 288


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 293 SIWFRCR*DRSTGVEKG*SNVEETVPG 213
           ++W  C+   + GVE+G   V   +PG
Sbjct: 190 TVWSHCQCVLADGVERGILTVNRMIPG 216


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 293 SIWFRCR*DRSTGVEKG*SNVEETVPG 213
           ++W  C+   + GVE+G   V   +PG
Sbjct: 190 TVWSHCQCVLADGVERGILTVNRMIPG 216


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 505 RSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H 609
           + RP  S  PP+ S   Q   Q    +H P  + H
Sbjct: 68  QKRPVTSPAPPVLSSSAQQQQQQQQLLHHPSSSPH 102



 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 523 SSHPPLRSRLHQPDHQIPDSIHQPPQT*HP 612
           SSH P+ +  H   H    +  QPP   HP
Sbjct: 807 SSHSPVGAGSHHLHHLHHHAAQQPPPGSHP 836


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 217  GTVSSTFDHPFSTPVLR 267
            G +S TFD PF +  LR
Sbjct: 1585 GELSRTFDRPFESVALR 1601


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,879
Number of Sequences: 2352
Number of extensions: 12522
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)