Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k17
(682 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.2
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 479 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIP 583
PS++R +G +A + PC + P+ P+P
Sbjct: 450 PSATRYDLGAVATVGTTVAPC---FEEPLPSLPLP 481
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHDFQH 226
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDH 567
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHDFQH 226
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,352
Number of Sequences: 438
Number of extensions: 3608
Number of successful extensions: 36
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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