Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k16
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 208 4e-54
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 204 4e-53
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 204 8e-53
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 147 9e-36
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 145 4e-35
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 144 7e-35
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 144 7e-35
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 144 7e-35
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 97 2e-20
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 97 2e-20
AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical ... 29 2.9
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 5.1
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 29 5.1
Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 8.9
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 208 bits (508), Expect = 4e-54
Identities = 92/188 (48%), Positives = 131/188 (69%), Gaps = 3/188 (1%)
Frame = +2
Query: 101 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 280
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 281 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-E 457
L G DY +FK+GI+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE F E
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDE 139
Query: 458 NSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTM 631
D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+D+
Sbjct: 140 YGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSS 199
Query: 632 VKHSSATK 655
+ SS K
Sbjct: 200 ARTSSTVK 207
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 204 bits (499), Expect = 4e-53
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 5/190 (2%)
Frame = +2
Query: 101 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 280
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 281 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF 454
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE F
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQF 139
Query: 455 -ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRD 625
E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+D
Sbjct: 140 DEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKD 199
Query: 626 TMVKHSSATK 655
+ + SS K
Sbjct: 200 SSARTSSTVK 209
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 204 bits (497), Expect = 8e-53
Identities = 94/191 (49%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Frame = +2
Query: 101 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 280
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 281 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGEN 451
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQ 139
Query: 452 F-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHR 622
F E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+
Sbjct: 140 FDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHK 199
Query: 623 DTMVKHSSATK 655
D+ + SS K
Sbjct: 200 DSSARTSSTVK 210
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 147 bits (356), Expect = 9e-36
Identities = 65/151 (43%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = +2
Query: 137 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 316
+PL+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRD 71
Query: 317 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 493
I+PMWE N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NV
Sbjct: 72 DIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNV 131
Query: 494 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL 586
R K KI++WT D + IG LKE+L
Sbjct: 132 RGKGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 145 bits (351), Expect = 4e-35
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
Frame = +2
Query: 131 IKHP---LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDY 301
I HP L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDY 71
Query: 302 AVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICG 478
VF+ GI PMWE N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG
Sbjct: 72 NVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCG 131
Query: 479 AVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL 586
V NVR K KI++WT ++ A + IG LK+ L
Sbjct: 132 IVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 144 bits (349), Expect = 7e-35
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 11/189 (5%)
Frame = +2
Query: 137 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 316
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 317 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 493
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 494 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHS 643
R + KI++WT + + IG LKE+L H K I +Q HR+ + K +
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTT 188
Query: 644 SATKNLYTV 670
SA K +++
Sbjct: 189 SALKYKFSL 197
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 144 bits (349), Expect = 7e-35
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 11/189 (5%)
Frame = +2
Query: 137 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 316
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 107
Query: 317 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 493
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 108 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 167
Query: 494 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHS 643
R + KI++WT + + IG LKE+L H K I +Q HR+ + K +
Sbjct: 168 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTT 227
Query: 644 SATKNLYTV 670
SA K +++
Sbjct: 228 SALKYKFSL 236
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 144 bits (349), Expect = 7e-35
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 11/189 (5%)
Frame = +2
Query: 137 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 316
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 317 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 493
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 494 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHS 643
R + KI++WT + + IG LKE+L H K I +Q HR+ + K +
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTT 188
Query: 644 SATKNLYTV 670
SA K +++
Sbjct: 189 SALKYKFSL 197
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +2
Query: 230 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 409
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 410 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 583
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 584 LGIHGKIGFQVHRDTMVKHSS---ATKNL 661
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +2
Query: 230 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 409
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 410 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 583
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 584 LGIHGKIGFQVHRDTMVKHSS---ATKNL 661
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical
protein Y105E8A.5 protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 692 KICNAKTKQCIDSWSQNYA*PLCLCVLGNQSCRVSLAVLSVFS 564
KI N+ T CI +++ A PL + V+G + C + L F+
Sbjct: 180 KIANSATITCIAKLTKSTAEPLDILVIGTEHCEIFLIDSQAFT 222
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 495 LTLTTAPQISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 325
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/93 (27%), Positives = 40/93 (43%)
Frame = +2
Query: 371 ISLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHA 550
I+ K RF++ W DV + +F+ D I K+ I T+ ++ H
Sbjct: 736 ITNPKASRFSESSLSWKDVKMSKTVLSFDVFDRI--------EKIVPFHILTS--IETHI 785
Query: 551 TIEIGKKLKEQLGIHGKIGFQVHRDTMVKHSSA 649
T+E+ K L E + KIG + V H SA
Sbjct: 786 TVELEKMLIEYISNARKIGVSFNLQNSVTHESA 818
>Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 284 RQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVV 430
+ GH Y K+ + WE + N G+W+ K++ +D+FW++V+
Sbjct: 227 KAGH-YQHLKKILYKKWESENN---GKWI-----KRKSNQVDKFWIEVI 266
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -1
Query: 474 QISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSH 331
++ E K +KR + K C F + +S +L++SS H
Sbjct: 1345 RLEVEVKKNKGVKRSVVKKELTFADYKNCLFDKTVSRKQQMLISSSKH 1392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,879,102
Number of Sequences: 27780
Number of extensions: 370047
Number of successful extensions: 931
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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