Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k13
(755 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P... 31 1.7
BT011475-1|AAR99133.1| 964|Drosophila melanogaster RE11167p pro... 31 2.2
BT011388-1|AAR96180.1| 567|Drosophila melanogaster GH14426p pro... 31 2.2
AY069528-1|AAL39673.1| 357|Drosophila melanogaster LD24604p pro... 31 2.2
AY058525-1|AAL13754.1| 970|Drosophila melanogaster LD23187p pro... 31 2.2
AE014134-2119|AAF53138.2| 970|Drosophila melanogaster CG6686-PA... 31 2.2
AE014134-2118|AAN10790.1| 964|Drosophila melanogaster CG6686-PB... 31 2.2
L08502-1|AAA28310.1| 766|Drosophila melanogaster developmental ... 30 3.9
L08501-1|AAA28723.1| 760|Drosophila melanogaster eyes absent I ... 30 3.9
AY047539-1|AAK77271.1| 760|Drosophila melanogaster GH05272p pro... 30 3.9
AE014134-1110|AAF52400.1| 766|Drosophila melanogaster CG9554-PA... 30 3.9
AE014134-1109|AAN10587.1| 760|Drosophila melanogaster CG9554-PB... 30 3.9
AY094935-1|AAM11288.1| 232|Drosophila melanogaster RH54060p pro... 29 6.8
AE014297-2557|AAF55579.1| 232|Drosophila melanogaster CG7700-PA... 29 6.8
AY089316-1|AAL90054.1| 411|Drosophila melanogaster AT12489p pro... 29 9.1
AE014297-2808|AAF55775.2| 411|Drosophila melanogaster CG5180-PA... 29 9.1
>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
protein.
Length = 1630
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 409 VKTQLCAIQESLNEAISTLNVHAAANSPAP-DINKLQDMIQDLQSEYN 549
VK + S N A T+ HAAANS P D+N I LQ E N
Sbjct: 1362 VKRRTTTRSPSQNAAKRTMETHAAANSKLPFDLNSAAYFICKLQDEGN 1409
>BT011475-1|AAR99133.1| 964|Drosophila melanogaster RE11167p protein.
Length = 964
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 813 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 872
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 873 DDNGRILNL 881
>BT011388-1|AAR96180.1| 567|Drosophila melanogaster GH14426p
protein.
Length = 567
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 416 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 475
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 476 DDNGRILNL 484
>AY069528-1|AAL39673.1| 357|Drosophila melanogaster LD24604p
protein.
Length = 357
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 206 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 265
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 266 DDNGRILNL 274
>AY058525-1|AAL13754.1| 970|Drosophila melanogaster LD23187p protein.
Length = 970
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 819 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 878
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 879 DDNGRILNL 887
>AE014134-2119|AAF53138.2| 970|Drosophila melanogaster CG6686-PA,
isoform A protein.
Length = 970
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 819 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 878
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 879 DDNGRILNL 887
>AE014134-2118|AAN10790.1| 964|Drosophila melanogaster CG6686-PB,
isoform B protein.
Length = 964
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 215
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 813 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 872
Query: 216 DQRGAIAQI 242
D G I +
Sbjct: 873 DDNGRILNL 881
>L08502-1|AAA28310.1| 766|Drosophila melanogaster developmental
protein eya II protein.
Length = 766
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 46 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 219
TD ST+ H +SP + L I+ S G G L +AA + S+GGS+V T
Sbjct: 391 TDTHSTTPVHQTTHSPHSPLP---ISPSTGSGIGPLGNVSAAAAAAALNSSGGSSVGT 445
>L08501-1|AAA28723.1| 760|Drosophila melanogaster eyes absent I
protein.
Length = 760
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 46 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 219
TD ST+ H +SP + L I+ S G G L +AA + S+GGS+V T
Sbjct: 385 TDTHSTTPVHQTTHSPHSPLP---ISPSTGSGIGPLGNVSAAAAAAALNSSGGSSVGT 439
>AY047539-1|AAK77271.1| 760|Drosophila melanogaster GH05272p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 46 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 219
TD ST+ H +SP + L I+ S G G L +AA + S+GGS+V T
Sbjct: 385 TDTHSTTPVHQTTHSPHSPLP---ISPSTGSGIGPLGNVSAAAAAAALNSSGGSSVGT 439
>AE014134-1110|AAF52400.1| 766|Drosophila melanogaster CG9554-PA,
isoform A protein.
Length = 766
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 46 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 219
TD ST+ H +SP + L I+ S G G L +AA + S+GGS+V T
Sbjct: 391 TDTHSTTPVHQTTHSPHSPLP---ISPSTGSGIGPLGNVSAAAAAAALNSSGGSSVGT 445
>AE014134-1109|AAN10587.1| 760|Drosophila melanogaster CG9554-PB,
isoform B protein.
Length = 760
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 46 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 219
TD ST+ H +SP + L I+ S G G L +AA + S+GGS+V T
Sbjct: 385 TDTHSTTPVHQTTHSPHSPLP---ISPSTGSGIGPLGNVSAAAAAAALNSSGGSSVGT 439
>AY094935-1|AAM11288.1| 232|Drosophila melanogaster RH54060p
protein.
Length = 232
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 388 VFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNK 552
VFD L E Q+ SLNE++S L AA + + ++++Q + E+NK
Sbjct: 55 VFDSLSEEIEQMLEKLSSLNESMSDLPASGAA--AMHTLQRHREILQGYRQEFNK 107
>AE014297-2557|AAF55579.1| 232|Drosophila melanogaster CG7700-PA
protein.
Length = 232
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 388 VFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNK 552
VFD L E Q+ SLNE++S L AA + + ++++Q + E+NK
Sbjct: 55 VFDSLSEEIEQMLEKLSSLNESMSDLPASGAA--AMHTLQRHREILQGYRQEFNK 107
>AY089316-1|AAL90054.1| 411|Drosophila melanogaster AT12489p
protein.
Length = 411
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/115 (19%), Positives = 43/115 (37%)
Frame = +1
Query: 37 IMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVW 216
I D+ S + +++ + + + ++G H G + P N G+T +
Sbjct: 290 ITSLDSNSQREIQQAVNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAY 349
Query: 217 TNAAPSHKLIKNNKNYIHVFGLFXXXXXXXXXXXXRPKEYYVLKSIISDLLMGAQ 381
T A + + + Y G+ P + V + +ISD+L AQ
Sbjct: 350 TTTAATSTSHRQDDEY-DAIGV----NVASKLRSINPTQRIVAEKLISDVLFNAQ 399
>AE014297-2808|AAF55775.2| 411|Drosophila melanogaster CG5180-PA
protein.
Length = 411
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/115 (19%), Positives = 43/115 (37%)
Frame = +1
Query: 37 IMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVW 216
I D+ S + +++ + + + ++G H G + P N G+T +
Sbjct: 290 ITSLDSNSQREIQQAVNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAY 349
Query: 217 TNAAPSHKLIKNNKNYIHVFGLFXXXXXXXXXXXXRPKEYYVLKSIISDLLMGAQ 381
T A + + + Y G+ P + V + +ISD+L AQ
Sbjct: 350 TTTAATSTSHRQDDEY-DAIGV----NVASKLRSINPTQRIVAEKLISDVLFNAQ 399
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,667,471
Number of Sequences: 53049
Number of extensions: 762797
Number of successful extensions: 1937
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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