Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k07
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104420-1|AAI04421.1| 249|Homo sapiens tumor necrosis factor (... 34 0.59
AY358870-1|AAQ89229.1| 249|Homo sapiens Apo-3 Ligand protein. 34 0.59
AY081051-1|AAL90443.1| 330|Homo sapiens TWE-PRIL protein. 34 0.59
AF055872-1|AAC39724.1| 249|Homo sapiens Apo3/DR3 ligand protein. 34 0.59
AF030099-1|AAC51923.1| 249|Homo sapiens TWEAK protein. 34 0.59
AB222993-1|BAE16557.1| 249|Homo sapiens TWEAK protein. 34 0.59
AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open readi... 32 2.4
AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open readi... 32 2.4
>BC104420-1|AAI04421.1| 249|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 12 protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AY358870-1|AAQ89229.1| 249|Homo sapiens Apo-3 Ligand protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AY081051-1|AAL90443.1| 330|Homo sapiens TWE-PRIL protein.
Length = 330
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AF055872-1|AAC39724.1| 249|Homo sapiens Apo3/DR3 ligand protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AF030099-1|AAC51923.1| 249|Homo sapiens TWEAK protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AB222993-1|BAE16557.1| 249|Homo sapiens TWEAK protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
E +P++LN + +Q F N L+ AP R + + Y+ H R +G
Sbjct: 63 EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122
Query: 90 AANSAGTRAGWDESR 46
A GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137
>AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 584 RLKGKCCR*VYKNETCQMQQSSNGHRNCKQR*KDPKKPTNW 706
R K + V +N Q+ S+GH C+ R KDPK+P W
Sbjct: 10 RWKHRSLSPVPRNAEHYKQRHSHGHYGCEYR-KDPKRPVAW 49
>AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 682
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 584 RLKGKCCR*VYKNETCQMQQSSNGHRNCKQR*KDPKKPTNW 706
R K + V +N Q+ S+GH C+ R KDPK+P W
Sbjct: 10 RWKHRSLSPVPRNAEHYKQRHSHGHYGCEYR-KDPKRPVAW 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,411,825
Number of Sequences: 237096
Number of extensions: 1579038
Number of successful extensions: 2672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2672
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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