Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k06
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.3  

>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 88  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 186
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 88  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 186
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 88  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 186
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 64  YLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTF 198
           + +Y  H  +  ++I++ + +    +EK     V  I SL  DTF
Sbjct: 279 FAIYEMHWYDASKQIQNEVFIFMGQLEKPIVFYVANIFSLDLDTF 323


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 274 WIFFCHFL 251
           W+F CHFL
Sbjct: 667 WLFHCHFL 674


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 274 WIFFCHFL 251
           W+F CHFL
Sbjct: 667 WLFHCHFL 674


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,472
Number of Sequences: 336
Number of extensions: 3610
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)