Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10k04
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 305 PSDIQSLYFSVFSRFLSQFLIFSL 234
           P+DI S YF    +F   +++F++
Sbjct: 36  PTDINSFYFYKTEQFTVLWVLFTM 59


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 592 CSGQR*RKTGYSRSTYCRLGINDAGCYKTI 681
           C  +   K  YS++TY   G   A  YK++
Sbjct: 336 CKNEDETKNHYSKNTYNEQGNKLADLYKSL 365


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 592 CSGQR*RKTGYSRSTYCRLGINDAGCYKTI 681
           C  +   K  YS++TY   G   A  YK++
Sbjct: 228 CKNEDETKNHYSKNTYNEQGNKLADLYKSL 257


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 491  ASYEFTTLTCIPGVI 535
            A YEF TLT   G I
Sbjct: 1575 AEYEFATLTVTGGTI 1589


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -1

Query: 441  TEGKPIKATRASPDFSTSKPSPL---SPP 364
            +EG P+K T   P   +S P      SPP
Sbjct: 1101 SEGVPLKGTAVPPPSGSSGPGSTGSKSPP 1129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,027
Number of Sequences: 336
Number of extensions: 2711
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)