Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10k03
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p pro... 291 7e-79
AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,... 291 7e-79
AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,... 291 7e-79
AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,... 291 7e-79
AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,... 291 7e-79
AY094778-1|AAM11131.1| 570|Drosophila melanogaster LD09231p pro... 33 0.34
AE014297-2310|AAF55387.2| 570|Drosophila melanogaster CG5175-PB... 33 0.34
AE014297-2309|AAN13733.1| 570|Drosophila melanogaster CG5175-PA... 33 0.34
AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P... 32 0.78
>AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p
protein.
Length = 186
Score = 291 bits (713), Expect = 7e-79
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 58 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 237
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 238 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 417
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 418 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 561
RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166
>AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,
isoform D protein.
Length = 186
Score = 291 bits (713), Expect = 7e-79
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 58 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 237
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 238 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 417
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 418 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 561
RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166
>AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,
isoform C protein.
Length = 186
Score = 291 bits (713), Expect = 7e-79
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 58 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 237
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 238 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 417
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 418 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 561
RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166
>AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,
isoform B protein.
Length = 186
Score = 291 bits (713), Expect = 7e-79
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 58 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 237
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 238 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 417
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 418 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 561
RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166
>AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,
isoform A protein.
Length = 186
Score = 291 bits (713), Expect = 7e-79
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 58 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 237
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 238 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 417
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120
Query: 418 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 561
RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166
>AY094778-1|AAM11131.1| 570|Drosophila melanogaster LD09231p
protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 318 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRSHQP 470
RR+PL++ + R QQ+ G S+ P +G + T++++P +S+QP
Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71
>AE014297-2310|AAF55387.2| 570|Drosophila melanogaster CG5175-PB,
isoform B protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 318 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRSHQP 470
RR+PL++ + R QQ+ G S+ P +G + T++++P +S+QP
Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71
>AE014297-2309|AAN13733.1| 570|Drosophila melanogaster CG5175-PA,
isoform A protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 318 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRSHQP 470
RR+PL++ + R QQ+ G S+ P +G + T++++P +S+QP
Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71
>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
protein.
Length = 1491
Score = 31.9 bits (69), Expect = 0.78
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1
Query: 650 CINLLFNPYVYSLIIFSF*RASFFLESFFFAGASSVGATLATASSRSL 507
C+ +F Y++SL++F +FF+ SFF S+V AT+ S +L
Sbjct: 98 CLMTIFLVYIHSLVLF-----AFFISSFFSRSLSAVVATILMYFSTAL 140
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,168,151
Number of Sequences: 53049
Number of extensions: 623469
Number of successful extensions: 1884
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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