Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j23
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.0  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.3  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 32  VIIPFFLLGVRLWT 73
           ++IP FLL V  WT
Sbjct: 129 ILIPHFLLPVAAWT 142


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 32  VIIPFFLLGVRLWT 73
           ++IP FLL V  WT
Sbjct: 129 ILIPHFLLPVAAWT 142


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 79  KWRPQTDTKQKERNYY 32
           KW+    +K+K R YY
Sbjct: 228 KWKKNDSSKKKTRYYY 243


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 275 ERVKERLGQTEALEQTQANIGREEKQ 352
           +R+ E + QTE++E  +  IGR  ++
Sbjct: 11  KRLFEHMLQTESIEPVKMAIGRPSEK 36


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 152  YLVPLEVLFVLHNFNESHILNLSYKVASTDGHQAKRK 42
            +LVP      LH   E H+ +  YKV      Q  +K
Sbjct: 1228 HLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQK 1264


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 215 LNNEAFTSIIISFPFTTPLEFYLVPL 138
           +N++AF S+    P +   E Y  P+
Sbjct: 302 VNDDAFNSVATPTPTSVMTELYPSPV 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,888
Number of Sequences: 336
Number of extensions: 1957
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)