Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10j23
(448 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626... 58 3e-09
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679... 56 2e-08
05_04_0084 - 17788077-17789240 32 0.18
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 31 0.56
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 30 0.74
01_07_0242 + 42234217-42234320,42234708-42235029,42235377-422357... 30 0.74
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 29 1.3
02_01_0475 + 3422629-3422695,3422960-3423216 28 3.0
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 28 3.9
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 28 3.9
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 27 5.2
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 5.2
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 27 6.9
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 27 6.9
05_01_0366 - 2867953-2868252,2868329-2868469,2868808-2869089,286... 27 6.9
01_06_1261 - 35826513-35828941,35829201-35829294 27 6.9
07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423 27 9.1
06_01_0397 + 2855273-2855347,2855515-2855606,2856317-2856347,285... 27 9.1
03_02_1022 + 13260647-13260834,13260965-13261070,13262052-132621... 27 9.1
>01_06_1659 +
38961637-38961639,38962361-38962433,38962531-38962613,
38962732-38962858,38962950-38963029,38963112-38963228,
38963393-38963527,38963714-38963883,38963970-38964087
Length = 301
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +3
Query: 102 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQ 215
GFVK K YFKR+QVKFKRRR+GKTDY AR RL Q
Sbjct: 3 GFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQ 40
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +3
Query: 216 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 395
+E++YKK H AIRADP+ K KK+ KR+N +KLT +Q+KAS ++RL A
Sbjct: 233 MESLYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-------YEQRKASLVERLNA 284
>01_06_1660 +
38966999-38967001,38967685-38967757,38967841-38967923,
38968042-38968168,38968260-38968339,38968428-38968544,
38968711-38968845,38969046-38969215,38969300-38969417
Length = 301
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +3
Query: 102 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQ 215
GFVK K Y KR+QVKFKRRR+GKTDY AR RL Q
Sbjct: 3 GFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQ 40
Score = 50.0 bits (114), Expect = 9e-07
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +3
Query: 216 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 395
+EA+YKK H AIRADP+ K KK+ KR+N +KLT +Q+KAS ++RL A
Sbjct: 233 MEALYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-------YEQRKASLVERLNA 284
>05_04_0084 - 17788077-17789240
Length = 387
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 VKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDS 296
+KNK K+ + KR ++ K D +L + A + A E + DP K+ +KKD
Sbjct: 266 IKNK---KKALEEAKRMQQAKEDPEKATKLAWDL-ARRRAAGEKVHDDPKLIKESMKKDK 321
Query: 297 VKQKR----WNKRKLTLAERKNRIKQKKASFIK 383
+Q++ W +R+ + ++K + K+ I+
Sbjct: 322 KRQQKHAEQWKERQKMVDKQKKERQSKRTENIR 354
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.7 bits (66), Expect = 0.56
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 270 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 368
KKK+ KK K+K+ NK+K ++K + K+KK
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106
Score = 29.9 bits (64), Expect = 0.97
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 225 IYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 380
+ KK + + KKK+ KK + K+K+ K+K ++K R KA I
Sbjct: 66 VMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQHI 117
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 270 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 386
KKK+ KK K+K+ K+K ++K + K+KK KR
Sbjct: 70 KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108
>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
Length = 126
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 195 RKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 368
R L +E KKA ++ P KKK+ KK K+K+ K+K E ++ ++Q+K
Sbjct: 33 RAELKKILELRKKKAKAKVKKKP--KKKKNKKAKKKKKKKKKKKKEEEEEESDVRQQK 88
>01_07_0242 +
42234217-42234320,42234708-42235029,42235377-42235778,
42235921-42236265,42236785-42236854,42237098-42237173,
42237309-42237459
Length = 489
Score = 30.3 bits (65), Expect = 0.74
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +3
Query: 177 KTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRI 356
K Y +KRL +Q + KK EA + DP + + KK +KQK + + L + +
Sbjct: 87 KRGYLTKKRLKLQRKREKKKRKEANKNDPRRIRPKGKK--IKQK-FPTPEARLKYKIEKA 143
Query: 357 KQKKASFIKRLQ 392
K K+A +++L+
Sbjct: 144 KLKEAMLVEKLK 155
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 198 KRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW---NKRKLTLAERKNRIKQKK 368
K+L +++A +K E + HK ++ +++ + R N+RK+ A+RK ++Q++
Sbjct: 197 KQLFDEVDAQLQKEKETALREARHKAEQERREREELDRMLEENRRKVEEAQRKEALEQQQ 256
Query: 369 ASF-----IKRLQAQAE 404
++R+Q Q E
Sbjct: 257 KELERFLELERIQKQRE 273
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 213 QIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 392
+++ + + A+ + KKK+ KK K+K+ K+K ++K + K K +S + L
Sbjct: 25 RVQVVLQLAYTIFGFEEGKKKKKKKKKKKKKKK--KKKKKKKKKKKKKKNKLSSAVTNLG 82
Query: 393 A 395
A
Sbjct: 83 A 83
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 263 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKE 367
+P E+ V ER + E LE + I EEK+ + +E
Sbjct: 518 LPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEE 552
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 159 KRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKK--KELKKDSVKQKRWNKRKLT 332
+RRRE K + R+R + +KA EA+ ADP ++ +EL++ +R
Sbjct: 20 ERRRERKKE--RRRRARREAAEAARKAAEALAADPEEERRLRELEEAEADASERARRAFE 77
Query: 333 LAERK 347
AER+
Sbjct: 78 DAERR 82
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 306 KRWNKRKLTLAERKNRIKQKK 368
+RW K KL+ +ERK R ++ K
Sbjct: 229 ERWKKEKLSKSERKRRAREAK 249
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 288 KDSVKQKRWNKRKLTLAERKNRIKQKKASFI 380
KD KQK + K +L L ERK + K+ F+
Sbjct: 142 KDERKQKVFYKNQLELEERKKKALDKQLDFL 172
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 213 QIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 365
++EA A E+ R KKE KKDS + + W+++K L E K K
Sbjct: 414 EMEAAKLSASESERQCQKLVKKE-KKDSKRLEMWDRQKAKLQEDIAECKTK 463
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 252 RADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 380
R +PS K KK K+K+ K+K ++K + K+KK F+
Sbjct: 363 RLNPSKTIKRKKKKKKKKKK--KKKKKKKKKKKKKKKKKLRFV 403
>05_01_0366 -
2867953-2868252,2868329-2868469,2868808-2869089,
2869177-2869569,2869796-2869975,2870149-2871510
Length = 885
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 362 KEGFLHQETAGSGGSLNALNIIFEALKK 445
KEG AGS +LN L I+F+AL K
Sbjct: 678 KEGSKFMGNAGSVTALNELEILFKALDK 705
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 263 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKEGFLHQETAGSGGSLN 412
I ++ ERL Q E + QT IG K ++ G +HQ+ SLN
Sbjct: 377 IEDSSKLSERLKQVEEVLQTIQRIG---KSVHSENGNIHQQLTEVDDSLN 423
>07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423
Length = 266
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +3
Query: 243 EAIRADPS----HKKKELKKDSVKQKRWNKRKLTLAERK 347
EA+ +PS HKKKE KK+ +K+ K + ++K
Sbjct: 212 EALDGEPSSPELHKKKEKKKEKSSEKKDRKERRKKKDKK 250
>06_01_0397 +
2855273-2855347,2855515-2855606,2856317-2856347,
2856687-2856830,2856935-2857162,2857374-2857487,
2857749-2858249
Length = 394
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 273 KKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAEA 407
K E K ++ Q WN T+ E RI+Q++ + +KR +A A A
Sbjct: 181 KLEAKLQNL-QVEWNGGSDTMEEILGRIQQREEAAVKRERAMAYA 224
>03_02_1022 +
13260647-13260834,13260965-13261070,13262052-13262169,
13262271-13262539
Length = 226
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +3
Query: 270 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAEA 407
+KK+ +K++ K + +RK + ERK R ++K+ + R+ + A
Sbjct: 72 RKKKRRKEAQKILQEKERKKRIEERKRRKQEKEIALYGRVLSSDNA 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,312,223
Number of Sequences: 37544
Number of extensions: 201495
Number of successful extensions: 772
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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