Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j21
         (220 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    28   0.045
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   0.73 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   3.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    21   6.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           20   9.0  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 27.9 bits (59), Expect = 0.045
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 105 SHQLVSNIIRQLCEALNDLHKHNFIHNDIK 16
           S  +  + +RQ+ EAL   H+++ IH D++
Sbjct: 93  SEAVACHYLRQILEALRYCHENDIIHRDVR 122


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 108 LSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENV 4
           L+H L S +     E      K +  H DIK +N+
Sbjct: 359 LAHSLASGVAHLHTEIFGTPGKPSIAHRDIKSKNI 393


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 144 PDLFETLQIKGELSHQLVSNIIRQLCEA 61
           P+L   L +  E   Q +  I +Q CEA
Sbjct: 343 PELLHNLNLMVEYCEQDIITIDKQKCEA 370


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/42 (19%), Positives = 15/42 (35%)
 Frame = -2

Query: 219  FFFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKGELSHQL 94
            F   ++   HGF  + +  M +   PD      +     H +
Sbjct: 938  FHLSQVLSGHGFFRDDLCRMGFTPSPDCIRCTGVPETAEHAM 979


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/27 (22%), Positives = 12/27 (44%)
 Frame = -2

Query: 219  FFFIKIYFNHGFINNQVIVMDYIDCPD 139
            F   ++   HGF    + +  + + PD
Sbjct: 981  FHLAQVLSGHGFFREYLAINGFTESPD 1007


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,552
Number of Sequences: 2352
Number of extensions: 1791
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 50
effective length of database: 446,379
effective search space used:  9820338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)