Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j20
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 462 PIYRLTHEPLETWQCV 415
           P  + +H P  TWQC+
Sbjct: 46  PRQKKSHPPQWTWQCI 61


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 486 LPVSTLVLPIYRLTHEPLETWQCVWSVLWLHWPL 385
           LPV  + L    LTH+   T+  VWS   L W +
Sbjct: 656 LPVRWMALE--SLTHQRYTTYSDVWSFGVLLWEI 687


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 570 PEVIENNLKKGKHRFTRPEVQTNLIGDLLYISVQLVS 680
           PE++   L K   +FT   + TN   D L      +S
Sbjct: 82  PEILRKVLVKDFDKFTNRNIATNESADPLAFHTLFIS 118


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 334 TPNSGSTVTQHC 299
           TPN+ +TV  HC
Sbjct: 141 TPNATNTVWSHC 152


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 334 TPNSGSTVTQHC 299
           TPN+ +TV  HC
Sbjct: 141 TPNATNTVWSHC 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,417
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)